Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PHF8Q9UPP1 AC091152.4-201ENST00000623480 3483 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 DDX50P1-201ENST00000438163 2400 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 Y_RNA.263-201ENST00000364659 114 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 SNORA7B-201ENST00000384360 139 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 PTMAP8-201ENST00000397729 342 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 MRPL32P1-201ENST00000406301 247 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 RNU2-17P-201ENST00000410290 190 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC231533.2-201ENST00000419045 978 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC027644.1-201ENST00000419595 298 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 GAPDHP69-201ENST00000425504 1008 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 NQO1-204ENST00000439109 924 ntTSL 2 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AL592437.1-201ENST00000443781 492 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 OR51B8P-201ENST00000449892 769 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 SNORA35.1-201ENST00000458908 128 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 RPSAP24-201ENST00000461543 873 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 RPS3AP17-201ENST00000472594 777 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AL928654.1-201ENST00000476081 354 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 RPL9P6-201ENST00000492764 598 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC104971.1-201ENST00000495117 578 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 OR7E87P-201ENST00000532397 929 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AP002004.1-206ENST00000532441 876 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 FAM30C-201ENST00000561158 410 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC108451.2-201ENST00000603875 538 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 MIR6070-201ENST00000613967 103 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AL357080.1-201ENST00000617394 239 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 AC091132.4-201ENST00000587960 2262 ntBASIC10.68□□□□□ -0.7
PHF8Q9UPP1 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC10.68□□□□□ -0.7
PHF8Q9UPP1 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 Y_RNA.9-201ENST00000362354 101 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 Y_RNA.450-201ENST00000384198 113 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 FAT1P1-201ENST00000406588 507 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 RPS7P13-201ENST00000413955 498 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC005099.1-201ENST00000442083 610 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AL136454.1-201ENST00000443181 466 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AL161454.1-201ENST00000446226 569 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AL354872.1-201ENST00000456361 967 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AL133480.2-201ENST00000456723 487 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 RPL35AP19-201ENST00000469425 329 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC117394.1-201ENST00000477323 567 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 RN7SL259P-201ENST00000478499 253 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 NCOR1P1-202ENST00000486162 291 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC073358.1-201ENST00000505671 684 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC005262.1-201ENST00000588562 362 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms