Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 RN7SKP128-201ENST00000364270 303 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 LRRC37A14P-201ENST00000452297 462 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AC092375.1-201ENST00000550410 637 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AL359704.2-201ENST00000604335 521 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 MIR199B-201ENST00000384849 110 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AC016739.1-201ENST00000405359 345 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 MIR1204-201ENST00000408388 67 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 FAR2P2-201ENST00000413041 594 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 FAR2P4-202ENST00000425399 584 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 FAR2P1-206ENST00000449736 709 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 AL513548.2-201ENST00000602994 1207 ntBASIC6.39□□□□□ -1.39
CHD7Q9P2D1 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CHD7Q9P2D1 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 SNORA11-201ENST00000408789 128 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 METTL15P3-201ENST00000415522 1221 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AC113412.1-201ENST00000425840 504 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 RN7SL708P-201ENST00000580952 299 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AL021918.2-201ENST00000613415 194 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 GNL2P1-201ENST00000451274 2190 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 RNU1-106P-201ENST00000384382 164 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 RPL36P18-201ENST00000419316 318 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AC004453.1-201ENST00000487895 408 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AL671862.1-201ENST00000515851 349 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 TXNP4-201ENST00000575018 310 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AP001496.3-201ENST00000580230 913 ntBASIC6.38□□□□□ -1.39
CHD7Q9P2D1 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD7Q9P2D1 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD7Q9P2D1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHD7Q9P2D1 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD7Q9P2D1 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
CHD7Q9P2D1 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD7Q9P2D1 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD7Q9P2D1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD7Q9P2D1 OR2W4P-201ENST00000406496 926 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms