Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 COX6B1P4-201ENST00000519826 484 ntBASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 AC068726.1-201ENST00000610993 341 ntBASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 MIR6085-201ENST00000618314 110 ntBASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 MIR6813-201ENST00000621638 56 ntBASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 AP001541.1-201ENST00000623322 1904 ntBASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 AC004023.1-201ENST00000561473 1744 ntBASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO3Q9BXY4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AL021877.2-201ENST00000624442 10684 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 HDAC1P2-201ENST00000453661 1398 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AC096921.2-201ENST00000561507 1916 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AC119674.1-213ENST00000641177 1386 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 RNA5SP478-201ENST00000364657 115 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AL360271.1-201ENST00000395679 510 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AL022324.2-201ENST00000434827 780 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 ARMC4P1-201ENST00000438905 707 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 H3F3BP1-201ENST00000440551 403 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 RPS10P14-201ENST00000440748 502 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 GAPDHP37-201ENST00000442317 968 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 VN1R38P-201ENST00000450265 887 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 RN7SL790P-201ENST00000474043 298 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 RN7SL649P-201ENST00000496974 275 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 IGHV1-14-201ENST00000523391 241 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 OR9G2P-201ENST00000533326 880 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 PRELID3BP3-201ENST00000584963 545 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AC005332.4-201ENST00000592752 579 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AC009135.2-201ENST00000624136 1768 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 AL133243.2-201ENST00000610331 1621 ntBASIC5.84□□□□□ -1.47
RSPO3Q9BXY4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.84□□□□□ -1.48
RSPO3Q9BXY4 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RSPO3Q9BXY4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RSPO3Q9BXY4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 AC019178.1-201ENST00000392337 440 ntBASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 AL157884.1-201ENST00000424561 454 ntBASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 AP003385.1-201ENST00000426387 893 ntBASIC5.83□□□□□ -1.48
RSPO3Q9BXY4 VN1R53P-201ENST00000429536 957 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms