Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 MIR4428-201ENST00000584884 73 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC012510.1-201ENST00000607946 759 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AOX3P-204ENST00000491025 2107 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 AC023245.2-201ENST00000530760 2978 ntBASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC28BQ9BUN5 PSMC1P6-201ENST00000477233 1319 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AP001157.1-201ENST00000550837 2339 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 RNA5SP301-201ENST00000362537 121 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 MRPS21P5-201ENST00000417885 231 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC114402.2-201ENST00000432760 643 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 RPL22P11-201ENST00000434894 385 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC092106.2-201ENST00000436597 487 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 GAPDHP20-201ENST00000444107 1007 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC092967.1-201ENST00000449016 481 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 SCARNA5-201ENST00000516201 276 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC024614.1-201ENST00000577546 307 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AP001357.1-201ENST00000586304 1053 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC091133.5-201ENST00000603088 301 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 AC007671.1-201ENST00000616957 830 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 TRIM53CP-201ENST00000531490 1354 ntBASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC28BQ9BUN5 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 GUCY1B2-204ENST00000531898 1979 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 RNA5SP321-201ENST00000362722 111 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 NPM1P31-201ENST00000399021 764 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 ETF1P1-206ENST00000427296 984 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 BX119904.3-201ENST00000428194 957 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 RPL14P5-201ENST00000436474 730 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 RPL7L1P3-201ENST00000455249 689 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 RN7SL223P-201ENST00000470401 294 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC022730.1-201ENST00000473114 568 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC093719.1-201ENST00000480427 441 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC022206.1-201ENST00000495947 347 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 RN7SL284P-201ENST00000498823 275 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC131392.1-201ENST00000506490 633 ntBASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC28BQ9BUN5 SETP17-201ENST00000534163 817 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms