Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC130448.2-201ENST00000624082 374 ntBASIC8.81□□□□□ -1
PTCH1Q13635 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.81□□□□□ -1
PTCH1Q13635 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.81□□□□□ -1
PTCH1Q13635 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
PTCH1Q13635 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.81□□□□□ -1
PTCH1Q13635 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.81□□□□□ -1
PTCH1Q13635 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 AC007993.1-201ENST00000621298 2430 ntBASIC8.81□□□□□ -1
PTCH1Q13635 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 AC062029.1-202ENST00000606164 3651 ntBASIC8.81□□□□□ -1
PTCH1Q13635 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.81□□□□□ -1
PTCH1Q13635 AL359922.2-201ENST00000581788 3017 ntBASIC8.81□□□□□ -1
PTCH1Q13635 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 AC119674.1-204ENST00000641348 1343 ntBASIC8.81□□□□□ -1
PTCH1Q13635 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.81□□□□□ -1
PTCH1Q13635 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTCH1Q13635 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC8.8□□□□□ -1
PTCH1Q13635 TMSB4XP2-201ENST00000335179 210 ntBASIC8.8□□□□□ -1
PTCH1Q13635 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.8□□□□□ -1
PTCH1Q13635 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.8□□□□□ -1
PTCH1Q13635 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.8□□□□□ -1
PTCH1Q13635 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.8□□□□□ -1
PTCH1Q13635 AP005119.1-201ENST00000580956 292 ntBASIC8.8□□□□□ -1
PTCH1Q13635 AL136228.1-201ENST00000622221 319 ntBASIC8.8□□□□□ -1
PTCH1Q13635 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.8□□□□□ -1
PTCH1Q13635 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 MAPK10-323ENST00000641493 3207 ntBASIC8.8□□□□□ -1
PTCH1Q13635 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 MARK2P4-201ENST00000503381 2380 ntBASIC8.8□□□□□ -1
PTCH1Q13635 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 AC062022.1-201ENST00000451026 1684 ntBASIC8.8□□□□□ -1
PTCH1Q13635 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.8□□□□□ -1
PTCH1Q13635 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
PTCH1Q13635 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8.8□□□□□ -1
PTCH1Q13635 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
PTCH1Q13635 RNU1-49P-201ENST00000363468 159 ntBASIC8.8□□□□□ -1
PTCH1Q13635 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.8□□□□□ -1
PTCH1Q13635 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.8□□□□□ -1
PTCH1Q13635 AL354890.1-201ENST00000413730 346 ntBASIC8.8□□□□□ -1
PTCH1Q13635 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
PTCH1Q13635 DUTP4-201ENST00000424782 475 ntBASIC8.8□□□□□ -1
PTCH1Q13635 TUBB4BP6-201ENST00000437576 479 ntBASIC8.8□□□□□ -1
PTCH1Q13635 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.8□□□□□ -1
PTCH1Q13635 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC8.8□□□□□ -1
PTCH1Q13635 RPS27AP2-201ENST00000457576 465 ntBASIC8.8□□□□□ -1
PTCH1Q13635 ACA64.1-201ENST00000459171 127 ntBASIC8.8□□□□□ -1
PTCH1Q13635 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
PTCH1Q13635 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC8.8□□□□□ -1
PTCH1Q13635 AP000648.1-201ENST00000529682 397 ntBASIC8.8□□□□□ -1
PTCH1Q13635 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.8□□□□□ -1
PTCH1Q13635 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC8.8□□□□□ -1
PTCH1Q13635 AL031601.1-201ENST00000605702 394 ntBASIC8.8□□□□□ -1
PTCH1Q13635 RBMY1HP-201ENST00000382759 1389 ntBASIC8.79□□□□□ -1
PTCH1Q13635 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
PTCH1Q13635 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.79□□□□□ -1
PTCH1Q13635 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.79□□□□□ -1
PTCH1Q13635 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
PTCH1Q13635 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 TATDN2P3-201ENST00000452855 3665 ntBASIC8.79□□□□□ -1
PTCH1Q13635 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
PTCH1Q13635 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
PTCH1Q13635 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 RN7SKP293-201ENST00000411389 296 ntBASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 441.8 ms