Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PGBD4P1-201ENST00000473644 407 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC105918.1-201ENST00000474399 838 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC008410.1-201ENST00000483777 339 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC105313.1-201ENST00000509121 353 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC111000.1-201ENST00000514545 713 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC091163.3-201ENST00000518269 1144 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AP001207.2-201ENST00000519490 539 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC025918.2-201ENST00000558683 763 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 MIR1273F-201ENST00000580581 99 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC245036.5-201ENST00000596330 847 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 COX6CP16-201ENST00000603667 216 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC079880.2-201ENST00000603790 1213 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC111186.1-201ENST00000604684 130 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 U6.48-201ENST00000618523 106 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC026422.1-201ENST00000623961 452 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 RPSAP68-201ENST00000625020 438 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 OR5AC4P-202ENST00000642086 985 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CLRN1P58418 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 AC007993.1-201ENST00000621298 2430 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 MFSD8-220ENST00000641243 1422 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CLRN1P58418 RN7SKP55-201ENST00000364888 307 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 SNORA70.5-201ENST00000365519 135 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 RNU6-468P-201ENST00000384003 109 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 CLIC4P3-201ENST00000422221 752 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 VN1R42P-201ENST00000424651 344 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CLRN1P58418 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 SOCS5P1-201ENST00000440415 949 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 MTCO1P53-201ENST00000441633 699 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 CEACAMP5-201ENST00000448037 961 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 RBMY3AP-201ENST00000449381 1145 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 RN7SL834P-201ENST00000461450 286 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 RPL34P34-201ENST00000465389 354 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 CYCSP20-201ENST00000473154 315 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms