Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RN7SKP187-201ENST00000365536 330 ntBASIC6.81□□□□□ -1.32
LHX1P48742 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.81□□□□□ -1.32
LHX1P48742 MIR188-201ENST00000385034 86 ntBASIC6.81□□□□□ -1.32
LHX1P48742 MTND2P12-201ENST00000417560 1252 ntBASIC6.81□□□□□ -1.32
LHX1P48742 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX1P48742 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX1P48742 BTG3P1-201ENST00000435859 716 ntBASIC6.81□□□□□ -1.32
LHX1P48742 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 MARK2P8-201ENST00000476069 952 ntBASIC6.81□□□□□ -1.32
LHX1P48742 RPL12P31-201ENST00000478433 450 ntBASIC6.81□□□□□ -1.32
LHX1P48742 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX1P48742 AC112484.3-201ENST00000505910 329 ntBASIC6.81□□□□□ -1.32
LHX1P48742 COX6B1P4-201ENST00000519826 484 ntBASIC6.81□□□□□ -1.32
LHX1P48742 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.81□□□□□ -1.32
LHX1P48742 AC107958.1-201ENST00000556576 290 ntBASIC6.81□□□□□ -1.32
LHX1P48742 AL078601.3-201ENST00000573303 535 ntBASIC6.81□□□□□ -1.32
LHX1P48742 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX1P48742 RN7SL475P-201ENST00000583379 298 ntBASIC6.81□□□□□ -1.32
LHX1P48742 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.81□□□□□ -1.32
LHX1P48742 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX1P48742 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.81□□□□□ -1.32
LHX1P48742 AC111152.1-202ENST00000635848 339 ntBASIC6.81□□□□□ -1.32
LHX1P48742 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LHX1P48742 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.81□□□□□ -1.32
LHX1P48742 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 AC241584.2-201ENST00000637142 2090 ntBASIC6.81□□□□□ -1.32
LHX1P48742 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 AKAP17BP-201ENST00000431706 2719 ntBASIC6.81□□□□□ -1.32
LHX1P48742 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.81□□□□□ -1.32
LHX1P48742 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LHX1P48742 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.8□□□□□ -1.32
LHX1P48742 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
LHX1P48742 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.8□□□□□ -1.32
LHX1P48742 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.8□□□□□ -1.32
LHX1P48742 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.8□□□□□ -1.32
LHX1P48742 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 FAM32BP-201ENST00000344033 333 ntBASIC6.8□□□□□ -1.32
LHX1P48742 RNA5SP232-201ENST00000364144 119 ntBASIC6.8□□□□□ -1.32
LHX1P48742 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
LHX1P48742 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 PARP4P1-201ENST00000435945 2337 ntBASIC6.8□□□□□ -1.32
LHX1P48742 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 VN1R38P-201ENST00000450265 887 ntBASIC6.8□□□□□ -1.32
LHX1P48742 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.8□□□□□ -1.32
LHX1P48742 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.8□□□□□ -1.32
LHX1P48742 OR7E22P-201ENST00000478335 1035 ntBASIC6.8□□□□□ -1.32
LHX1P48742 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 RN7SL714P-201ENST00000487050 298 ntBASIC6.8□□□□□ -1.32
LHX1P48742 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.8□□□□□ -1.32
LHX1P48742 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.8□□□□□ -1.32
LHX1P48742 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.8□□□□□ -1.32
LHX1P48742 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.8□□□□□ -1.32
LHX1P48742 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.8□□□□□ -1.32
LHX1P48742 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.8□□□□□ -1.32
LHX1P48742 AC007066.2-202ENST00000566531 914 ntBASIC6.8□□□□□ -1.32
LHX1P48742 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.8□□□□□ -1.32
LHX1P48742 SMIM12P1-201ENST00000603004 274 ntBASIC6.8□□□□□ -1.32
LHX1P48742 AL135999.3-201ENST00000610501 812 ntBASIC6.8□□□□□ -1.32
LHX1P48742 uc_338.31-201ENST00000615595 186 ntBASIC6.8□□□□□ -1.32
LHX1P48742 MIR6721-201ENST00000617181 87 ntBASIC6.8□□□□□ -1.32
LHX1P48742 AL109924.4-201ENST00000623089 670 ntBASIC6.8□□□□□ -1.32
LHX1P48742 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.8□□□□□ -1.32
LHX1P48742 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LHX1P48742 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.8□□□□□ -1.32
LHX1P48742 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.8□□□□□ -1.32
LHX1P48742 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 AC022819.1-201ENST00000563495 3910 ntBASIC6.8□□□□□ -1.32
LHX1P48742 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LHX1P48742 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX1P48742 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
LHX1P48742 AL136984.1-201ENST00000607611 1893 ntBASIC6.79□□□□□ -1.32
LHX1P48742 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
LHX1P48742 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
LHX1P48742 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 AC104162.1-201ENST00000430831 2382 ntBASIC6.79□□□□□ -1.32
LHX1P48742 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX1P48742 AC105235.1-201ENST00000623208 1816 ntBASIC6.79□□□□□ -1.32
LHX1P48742 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX1P48742 AC107977.1-201ENST00000355745 939 ntBASIC6.79□□□□□ -1.32
LHX1P48742 RBBP4P5-201ENST00000398583 1266 ntBASIC6.79□□□□□ -1.32
LHX1P48742 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.79□□□□□ -1.32
LHX1P48742 CXCR2P1-202ENST00000443392 1074 ntBASIC6.79□□□□□ -1.32
LHX1P48742 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.79□□□□□ -1.32
LHX1P48742 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.79□□□□□ -1.32
LHX1P48742 RN7SL369P-201ENST00000477138 299 ntBASIC6.79□□□□□ -1.32
LHX1P48742 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.79□□□□□ -1.32
LHX1P48742 AC091874.2-201ENST00000505889 720 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms