Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNU6-891P-201ENST00000384280 111 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 AL136116.2-201ENST00000404020 785 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 RNA5SP155-201ENST00000411154 129 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.94□□□□□ -1.46
APOBEC1P41238 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
APOBEC1P41238 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 RSL24D1P8-201ENST00000434442 492 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 SUMO2P8-201ENST00000434672 286 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.94□□□□□ -1.46
APOBEC1P41238 RPS19P6-201ENST00000441327 433 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.94□□□□□ -1.46
APOBEC1P41238 MTND3P4-201ENST00000453537 303 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.94□□□□□ -1.46
APOBEC1P41238 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.94□□□□□ -1.46
APOBEC1P41238 RPS4XP17-201ENST00000479057 754 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.94□□□□□ -1.46
APOBEC1P41238 RPL19P11-201ENST00000495944 589 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 AC112184.1-201ENST00000505179 312 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
APOBEC1P41238 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.94□□□□□ -1.46
APOBEC1P41238 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.94□□□□□ -1.46
APOBEC1P41238 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 AC133552.4-201ENST00000576103 676 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 AL078623.1-201ENST00000602702 907 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 MIR6774-201ENST00000614651 70 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 MIR6849-201ENST00000618543 69 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 AL121936.2-201ENST00000641935 662 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
APOBEC1P41238 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
APOBEC1P41238 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.94□□□□□ -1.46
APOBEC1P41238 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.94□□□□□ -1.46
APOBEC1P41238 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
APOBEC1P41238 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
APOBEC1P41238 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
APOBEC1P41238 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.94□□□□□ -1.46
APOBEC1P41238 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
APOBEC1P41238 AC023245.2-201ENST00000530760 2978 ntBASIC5.94□□□□□ -1.46
APOBEC1P41238 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
APOBEC1P41238 AL033543.1-201ENST00000623440 13454 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 RNA5SP308-201ENST00000362532 115 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
APOBEC1P41238 MIR1266-201ENST00000408125 84 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.93□□□□□ -1.46
APOBEC1P41238 MTND2P12-201ENST00000417560 1252 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.93□□□□□ -1.46
APOBEC1P41238 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.93□□□□□ -1.46
APOBEC1P41238 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 AC083855.1-201ENST00000440041 258 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 HMGN1P32-201ENST00000441744 256 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.93□□□□□ -1.46
APOBEC1P41238 WDR82P2-201ENST00000444540 928 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.93□□□□□ -1.46
APOBEC1P41238 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.93□□□□□ -1.46
APOBEC1P41238 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.93□□□□□ -1.46
APOBEC1P41238 RN7SL83P-201ENST00000468131 297 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AP003385.3-201ENST00000472498 287 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 DEFB109A-201ENST00000482450 265 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 H3F3AP3-201ENST00000497682 407 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AC091965.3-201ENST00000506236 208 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AP002981.1-201ENST00000517692 975 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.93□□□□□ -1.46
APOBEC1P41238 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.93□□□□□ -1.46
APOBEC1P41238 AC027796.1-201ENST00000575593 512 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.93□□□□□ -1.46
APOBEC1P41238 PRELID3BP3-201ENST00000584963 545 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 RPL29P33-201ENST00000587474 316 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.93□□□□□ -1.46
APOBEC1P41238 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.93□□□□□ -1.46
APOBEC1P41238 AC036176.3-201ENST00000602456 418 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AC012065.3-201ENST00000602736 439 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.93□□□□□ -1.46
APOBEC1P41238 SNORD96A-201ENST00000606577 79 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.93□□□□□ -1.46
APOBEC1P41238 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.93□□□□□ -1.46
APOBEC1P41238 AC073488.9-201ENST00000631601 754 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.93□□□□□ -1.46
APOBEC1P41238 AC092646.2-201ENST00000431242 2095 ntBASIC5.93□□□□□ -1.46
APOBEC1P41238 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
APOBEC1P41238 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.93□□□□□ -1.46
APOBEC1P41238 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
APOBEC1P41238 TMEM75-201ENST00000624314 2165 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms