Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 AC083799.1-201ENST00000366451 910 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 AL391419.1-201ENST00000398901 1275 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 PSMA6P1-201ENST00000400275 741 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.81□□□□□ -1.32
HOXD12P35452 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD12P35452 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD12P35452 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD12P35452 LSM3P3-201ENST00000436601 306 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD12P35452 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD12P35452 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD12P35452 AC104339.1-201ENST00000465478 348 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 RN7SL88P-201ENST00000480166 299 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 AC106822.1-201ENST00000502647 526 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD12P35452 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 AC130364.2-201ENST00000528639 604 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
HOXD12P35452 MIR3135A-201ENST00000578460 77 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD12P35452 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 AC079315.1-201ENST00000602952 623 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 AC012368.3-201ENST00000604190 219 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 MIR6071-201ENST00000616741 78 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HOXD12P35452 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HOXD12P35452 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 AC130360.2-201ENST00000533477 1556 ntBASIC6.81□□□□□ -1.32
HOXD12P35452 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD12P35452 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD12P35452 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
HOXD12P35452 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD12P35452 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
HOXD12P35452 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD12P35452 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
HOXD12P35452 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
HOXD12P35452 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
HOXD12P35452 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXD12P35452 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
HOXD12P35452 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
HOXD12P35452 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD12P35452 AL121916.1-201ENST00000429405 308 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD12P35452 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 AC073072.2-201ENST00000447425 348 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD12P35452 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 TAAR4P-201ENST00000454843 1039 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD12P35452 AC096922.1-201ENST00000461635 651 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXD12P35452 AC005017.1-201ENST00000482002 490 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 RN7SL413P-201ENST00000482700 297 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 RN7SL362P-201ENST00000494228 267 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 AC113367.2-201ENST00000505749 160 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD12P35452 SNORA74.1-201ENST00000516320 180 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXD12P35452 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms