Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC069542.2-201ENST00000624816 216 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC026108.1-201ENST00000635444 547 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC023245.2-201ENST00000530760 2978 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC027279.4-201ENST00000624371 2072 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 SNORA5.1-201ENST00000384275 131 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 OR7E91P-201ENST00000400027 866 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AL158827.1-201ENST00000416300 391 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AL590128.1-201ENST00000433407 286 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AL354714.5-201ENST00000450131 590 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC019080.2-201ENST00000453859 394 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 RPSAP48-201ENST00000466509 889 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 RPL23AP64-201ENST00000469465 435 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 PPP1R2P6-201ENST00000478565 588 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 RN7SL182P-201ENST00000496499 300 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC008945.1-201ENST00000505144 499 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 MTCYBP44-201ENST00000514835 823 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 SCARNA18.2-201ENST00000516882 84 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC091304.4-201ENST00000565703 620 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC092032.1-201ENST00000603090 165 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 AL590032.1-201ENST00000604920 252 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 AL021368.3-201ENST00000607119 578 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AL136097.3-201ENST00000611097 505 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC087893.2-201ENST00000623272 255 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC114546.4-201ENST00000624413 369 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HLA-DMAP28067 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 ZNF806-201ENST00000438300 1774 ntBASIC5.52□□□□□ -1.53
HLA-DMAP28067 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DMAP28067 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DMAP28067 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DMAP28067 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DMAP28067 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DMAP28067 OR10D1P-201ENST00000355343 936 ntBASIC5.51□□□□□ -1.53
HLA-DMAP28067 RNA5SP474-201ENST00000391234 90 ntBASIC5.51□□□□□ -1.53
HLA-DMAP28067 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DMAP28067 AL357632.1-201ENST00000426688 643 ntBASIC5.51□□□□□ -1.53
HLA-DMAP28067 RPS27AP6-201ENST00000427962 448 ntBASIC5.51□□□□□ -1.53
HLA-DMAP28067 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 RPL7P14-201ENST00000449851 741 ntBASIC5.51□□□□□ -1.53
HLA-DMAP28067 AL096803.1-201ENST00000456921 1021 ntBASIC5.51□□□□□ -1.53
HLA-DMAP28067 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DMAP28067 RPL7AP23-201ENST00000482625 776 ntBASIC5.51□□□□□ -1.53
HLA-DMAP28067 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms