Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
ERCC3P19447 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
ERCC3P19447 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
ERCC3P19447 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.35□□□□□ -1.07
ERCC3P19447 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
ERCC3P19447 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.35□□□□□ -1.07
ERCC3P19447 RN7SKP148-201ENST00000410179 275 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 DHFRP2-201ENST00000414224 547 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 AC005005.2-201ENST00000420779 380 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 AC006065.1-201ENST00000422539 802 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 NDUFA5P10-201ENST00000432147 357 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 CHCHD4P5-201ENST00000436684 427 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 BX005266.3-201ENST00000443013 1075 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 Z77249.1-201ENST00000444622 1175 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 CYCSP42-201ENST00000450823 238 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC092155.2-201ENST00000454675 477 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 AC008280.2-201ENST00000455473 307 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC117394.1-201ENST00000477323 567 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 RN7SL306P-201ENST00000492941 296 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC112673.1-201ENST00000513168 575 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 RN7SKP141-201ENST00000516167 338 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC8.35□□□□□ -1.07
ERCC3P19447 OR5F2P-201ENST00000532761 941 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC8.35□□□□□ -1.07
ERCC3P19447 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 AC092159.4-201ENST00000624944 550 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 AC132825.1-201ENST00000463573 2247 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.35□□□□□ -1.07
ERCC3P19447 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
ERCC3P19447 SAMMSON-222ENST00000641901 2727 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 AL589993.1-201ENST00000407450 2524 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 AC009220.2-201ENST00000489759 1751 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 OR2A3P-202ENST00000641249 1776 ntBASIC8.35□□□□□ -1.07
ERCC3P19447 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.35□□□□□ -1.07
ERCC3P19447 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ERCC3P19447 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 MTCO1P28-201ENST00000574177 1528 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 FBXL21-201ENST00000297158 1305 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.34□□□□□ -1.07
ERCC3P19447 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.34□□□□□ -1.07
ERCC3P19447 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms