Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 AL391262.1-201ENST00000556558 1992 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 SNORA64.3-201ENST00000365647 134 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 MT-RNR1-201ENST00000389680 954 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 RN7SKP129-201ENST00000410288 299 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 RN7SKP221-201ENST00000410420 301 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 RPL7AP51-201ENST00000422016 760 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 GPN3P1-201ENST00000423883 535 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 SETP10-201ENST00000424368 814 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 AL139415.1-201ENST00000424862 352 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 AC083862.1-201ENST00000427378 1242 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 PMS2P9-201ENST00000441237 515 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC234771.2-201ENST00000445718 597 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC025181.1-201ENST00000477507 416 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC044810.1-201ENST00000480271 711 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 H3F3AP3-201ENST00000497682 407 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC131392.1-201ENST00000506490 633 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC5.91□□□□□ -1.46
ZIC3O60481 AP000662.1-201ENST00000530952 487 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC5.91□□□□□ -1.46
ZIC3O60481 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 RPL3P13-201ENST00000550415 216 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 AC037479.1-201ENST00000558361 625 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 AC025283.1-201ENST00000572039 734 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 SYPL1P2-201ENST00000582878 727 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 WBP1LP11-201ENST00000586141 328 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 ADAD1P2-201ENST00000588476 646 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC063977.7-201ENST00000594454 337 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC012368.3-201ENST00000604190 219 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 NDUFB9P1-201ENST00000604683 510 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 AC019257.2-201ENST00000605539 497 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.91□□□□□ -1.46
ZIC3O60481 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 AC062022.1-201ENST00000451026 1684 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 FO082842.1-201ENST00000423552 1370 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ZIC3O60481 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.91□□□□□ -1.46
ZIC3O60481 AC011592.1-201ENST00000624647 3634 ntBASIC5.91□□□□□ -1.46
ZIC3O60481 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 AC092821.3-202ENST00000641304 2767 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 TMEM75-201ENST00000624314 2165 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ZIC3O60481 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ZIC3O60481 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.9□□□□□ -1.46
ZIC3O60481 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZIC3O60481 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.9□□□□□ -1.46
ZIC3O60481 CYCSP52-201ENST00000422857 310 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 MED28P4-201ENST00000433137 572 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 Z85994.2-201ENST00000434327 452 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 LINC00328-2P-201ENST00000436585 219 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.9□□□□□ -1.46
ZIC3O60481 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.9□□□□□ -1.46
ZIC3O60481 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.9□□□□□ -1.46
ZIC3O60481 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.9□□□□□ -1.46
ZIC3O60481 AL356390.1-201ENST00000455684 397 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AC098818.1-201ENST00000478593 252 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AC022415.1-202ENST00000486612 523 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.9□□□□□ -1.46
ZIC3O60481 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.9□□□□□ -1.46
ZIC3O60481 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.9□□□□□ -1.46
ZIC3O60481 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.9□□□□□ -1.46
ZIC3O60481 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.9□□□□□ -1.46
ZIC3O60481 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.9□□□□□ -1.46
ZIC3O60481 AP001000.1-201ENST00000526843 742 ntBASIC5.9□□□□□ -1.46
ZIC3O60481 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.9□□□□□ -1.46
ZIC3O60481 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.9□□□□□ -1.46
ZIC3O60481 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms