Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6□□□□□ -1.45
SSX4O60224 RNA5SP176-201ENST00000390956 110 ntBASIC6□□□□□ -1.45
SSX4O60224 RN7SKP188-201ENST00000410789 317 ntBASIC6□□□□□ -1.45
SSX4O60224 RPL18AP14-201ENST00000417685 526 ntBASIC6□□□□□ -1.45
SSX4O60224 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6□□□□□ -1.45
SSX4O60224 CLNS1AP1-201ENST00000435954 682 ntBASIC6□□□□□ -1.45
SSX4O60224 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6□□□□□ -1.45
SSX4O60224 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6□□□□□ -1.45
SSX4O60224 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6□□□□□ -1.45
SSX4O60224 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 NACAP5-201ENST00000509863 636 ntBASIC6□□□□□ -1.45
SSX4O60224 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 AC084337.1-201ENST00000524809 686 ntBASIC6□□□□□ -1.45
SSX4O60224 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6□□□□□ -1.45
SSX4O60224 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6□□□□□ -1.45
SSX4O60224 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 AC097641.3-201ENST00000613523 464 ntBASIC6□□□□□ -1.45
SSX4O60224 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 AL391597.1-201ENST00000618707 694 ntBASIC6□□□□□ -1.45
SSX4O60224 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SSX4O60224 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6□□□□□ -1.45
SSX4O60224 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6□□□□□ -1.45
SSX4O60224 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6□□□□□ -1.45
SSX4O60224 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX4O60224 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SSX4O60224 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SSX4O60224 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.99□□□□□ -1.45
SSX4O60224 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 AC110373.1-201ENST00000505994 3505 ntBASIC5.99□□□□□ -1.45
SSX4O60224 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.99□□□□□ -1.45
SSX4O60224 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 AC007012.2-201ENST00000623206 1676 ntBASIC5.99□□□□□ -1.45
SSX4O60224 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 RPL24P4-201ENST00000326586 421 ntBASIC5.99□□□□□ -1.45
SSX4O60224 OR7E25P-201ENST00000344844 931 ntBASIC5.99□□□□□ -1.45
SSX4O60224 RN7SKP107-201ENST00000364157 290 ntBASIC5.99□□□□□ -1.45
SSX4O60224 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.99□□□□□ -1.45
SSX4O60224 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 BMP6P1-201ENST00000431230 679 ntBASIC5.99□□□□□ -1.45
SSX4O60224 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 AL034369.1-201ENST00000453808 477 ntBASIC5.99□□□□□ -1.45
SSX4O60224 PSPC1P2-201ENST00000455130 225 ntBASIC5.99□□□□□ -1.45
SSX4O60224 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 BX323845.2-201ENST00000458382 234 ntBASIC5.99□□□□□ -1.45
SSX4O60224 RN7SKP198-201ENST00000459286 306 ntBASIC5.99□□□□□ -1.45
SSX4O60224 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX4O60224 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 RN7SL561P-201ENST00000488553 281 ntBASIC5.99□□□□□ -1.45
SSX4O60224 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 PGAM4P2-201ENST00000512491 721 ntBASIC5.99□□□□□ -1.45
SSX4O60224 RN7SKP248-201ENST00000516278 305 ntBASIC5.99□□□□□ -1.45
SSX4O60224 IGLC4-201ENST00000517690 248 ntBASIC5.99□□□□□ -1.45
SSX4O60224 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.99□□□□□ -1.45
SSX4O60224 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX4O60224 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX4O60224 AC011447.2-201ENST00000592921 283 ntBASIC5.99□□□□□ -1.45
SSX4O60224 AL953862.2-201ENST00000603089 820 ntBASIC5.99□□□□□ -1.45
SSX4O60224 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX4O60224 AC018690.1-201ENST00000608144 626 ntBASIC5.99□□□□□ -1.45
SSX4O60224 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SSX4O60224 RN7SL126P-201ENST00000616400 299 ntBASIC5.99□□□□□ -1.45
SSX4O60224 AC079949.2-201ENST00000617117 2933 ntBASIC5.99□□□□□ -1.45
SSX4O60224 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX4O60224 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms