Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AL023284.3-201ENST00000407767 334 ntBASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 NPM1P25-201ENST00000429734 854 ntBASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC093325.1-201ENST00000508378 326 ntBASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 SCARNA5-201ENST00000516201 276 ntBASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC005519.1-201ENST00000554490 601 ntBASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 HNRNPCP1-201ENST00000556181 766 ntBASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 MRPL57P1-201ENST00000621486 265 ntBASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC006213.6-201ENST00000623722 4179 ntBASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC162PA2VCL2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 IMMTP1-201ENST00000435590 2219 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 RBPJP6-201ENST00000411556 1431 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC011504.1-201ENST00000623331 4103 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC011455.2-201ENST00000599320 3336 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 RNA5SP308-201ENST00000362532 115 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 RNU1-5P-201ENST00000362684 144 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 SNORA70H-201ENST00000383910 135 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 SNORA70J-201ENST00000384182 135 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC019178.1-201ENST00000392337 440 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC026310.1-201ENST00000396004 378 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 RN7SKP205-201ENST00000410999 307 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 CYCSP52-201ENST00000422857 310 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AP003385.1-201ENST00000426387 893 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AL451136.1-201ENST00000435399 325 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AKR1D1P1-201ENST00000457236 936 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 H3F3AP3-201ENST00000497682 407 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC026956.1-201ENST00000558741 396 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AC068408.1-201ENST00000577406 1144 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AL121936.2-201ENST00000641935 662 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 AL731556.1-201ENST00000394628 3711 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 GTF2IP4-201ENST00000453092 2054 ntBASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC162PA2VCL2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
CCDC162PA2VCL2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.52□□□□□ -1.36
CCDC162PA2VCL2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
CCDC162PA2VCL2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC162PA2VCL2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC162PA2VCL2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC162PA2VCL2 FANCD2P2-201ENST00000437591 1400 ntBASIC6.52□□□□□ -1.37
CCDC162PA2VCL2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC162PA2VCL2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms