Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC008868.1-201ENST00000509786 737 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 OR52H2P-201ENST00000514607 902 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC093878.1-201ENST00000515630 432 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC130366.1-201ENST00000526505 1192 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 ANP32BP1-202ENST00000568553 737 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AL049840.5-201ENST00000602827 552 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AL139041.1-201ENST00000605480 610 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AL512413.1-201ENST00000606489 382 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC132825.8-201ENST00000640783 297 ntBASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.7□□□□□ -1.5
RHBDD3Q9Y3P4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC022306.1-201ENST00000560489 1562 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 FUNDC2P3-201ENST00000334716 533 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 SNORA38B-201ENST00000363524 131 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AL451142.1-201ENST00000375867 775 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 MIR138-2-201ENST00000384916 84 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 MIR27A-201ENST00000385073 78 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 MRPL32P1-201ENST00000406301 247 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 Z68868.1-201ENST00000429048 544 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 RPL3P11-201ENST00000434028 1146 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC013410.1-201ENST00000436223 1232 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 RPS10P14-201ENST00000440748 502 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AL845321.1-201ENST00000444603 348 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AL133480.2-201ENST00000456723 487 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 RPL17P2-201ENST00000491913 451 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AL390198.2-201ENST00000510553 222 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC073916.1-201ENST00000545095 130 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC100832.2-201ENST00000582080 776 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AL583832.1-201ENST00000603227 784 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AL356986.1-201ENST00000604085 341 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC005277.2-201ENST00000617898 390 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC004836.1-201ENST00000623032 634 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC127071.2-201ENST00000623293 527 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC027559.1-201ENST00000636288 271 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AP000550.3-201ENST00000637734 379 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC006511.3-201ENST00000624929 1783 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 AC022613.3-201ENST00000560740 1346 ntBASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.69□□□□□ -1.5
RHBDD3Q9Y3P4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms