Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 AC129778.1-202ENST00000623812 261 ntBASIC8.04□□□□□ -1.12
SCN11AQ9UI33 AL591379.1-207ENST00000635982 261 ntBASIC8.04□□□□□ -1.12
SCN11AQ9UI33 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.04□□□□□ -1.12
SCN11AQ9UI33 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AC107398.3-201ENST00000562284 7000 ntBASIC8.03□□□□□ -1.12
SCN11AQ9UI33 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 RPL7P51-201ENST00000490532 749 ntBASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AP000648.1-201ENST00000529682 397 ntBASIC8.03□□□□□ -1.12
SCN11AQ9UI33 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AC097467.4-201ENST00000605504 141 ntBASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AL031601.1-201ENST00000605702 394 ntBASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AC119674.1-202ENST00000641333 1860 ntBASIC8.03□□□□□ -1.12
SCN11AQ9UI33 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC8.02□□□□□ -1.12
SCN11AQ9UI33 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
SCN11AQ9UI33 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
SCN11AQ9UI33 RNA5SP284-201ENST00000384547 118 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AL132875.1-201ENST00000403623 949 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 RNA5SP156-201ENST00000410250 110 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 RPS14P4-201ENST00000415880 418 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AL353662.1-201ENST00000439099 327 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AC092865.1-201ENST00000544395 1023 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 OR7A1P-202ENST00000641542 1158 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AC110716.2-201ENST00000563865 3945 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AC087752.1-201ENST00000391360 558 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 RPL12P16-201ENST00000431098 498 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AC239803.2-201ENST00000610161 430 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 AC026124.2-201ENST00000621847 656 ntBASIC8.02□□□□□ -1.13
SCN11AQ9UI33 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SCN11AQ9UI33 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AL731556.1-201ENST00000394628 3711 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 MROH3P-201ENST00000435735 2676 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 RN7SKP286-201ENST00000410894 299 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 RPL35AP31-201ENST00000418340 337 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 BRWD1P3-201ENST00000428816 390 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 HNRNPA1P18-201ENST00000433537 927 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AC092865.4-201ENST00000477936 615 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AC112191.2-201ENST00000522428 333 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms