Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC015849.6-201ENST00000605454 474 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC008147.4-201ENST00000617570 1204 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 RAB28P4-201ENST00000622233 665 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC127071.2-201ENST00000623293 527 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AC022919.1-201ENST00000624979 626 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 SNORA16A-202ENST00000628458 135 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL139254.3-201ENST00000641097 674 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 ZNF806-201ENST00000438300 1774 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AP004289.1-201ENST00000436307 2205 ntBASIC6.86□□□□□ -1.31
DKK3Q9UBP4 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.86□□□□□ -1.31
DKK3Q9UBP4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC015871.3-201ENST00000618835 2261 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AL355377.1-201ENST00000621125 1653 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC019178.1-201ENST00000392337 440 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 UBBP1-201ENST00000392399 473 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 MTND4P15-201ENST00000437913 1033 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 SCAND3P1-201ENST00000439854 1060 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 RPL12P11-201ENST00000439970 501 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 RPL23AP28-201ENST00000448062 470 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AL121578.2-201ENST00000448797 447 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC236972.4-201ENST00000458091 963 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AP003385.3-201ENST00000472498 287 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 IGKV2-4-201ENST00000523070 340 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AL591767.3-201ENST00000554632 525 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC138207.8-204ENST00000579588 527 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC009303.3-201ENST00000591103 736 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC104307.1-201ENST00000616142 196 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC034229.6-201ENST00000623704 224 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AP003400.2-201ENST00000624036 666 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC004808.2-201ENST00000627965 773 ntBASIC6.85□□□□□ -1.31
DKK3Q9UBP4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DKK3Q9UBP4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC005034.3-201ENST00000604845 1747 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC079949.2-201ENST00000617117 2933 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms