Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MIR23B-201ENST00000384832 97 ntBASIC5.98□□□□□ -1.45
CHD8Q9HCK8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC020890.1-201ENST00000491837 504 ntBASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 OR4A13P-201ENST00000529316 942 ntBASIC5.98□□□□□ -1.45
CHD8Q9HCK8 IZUMO3-202ENST00000543880 1229 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC079075.1-201ENST00000559543 878 ntBASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.98□□□□□ -1.45
CHD8Q9HCK8 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 AL356801.1-201ENST00000559320 294 ntBASIC5.98□□□□□ -1.45
CHD8Q9HCK8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHD8Q9HCK8 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 BX323845.3-201ENST00000428215 527 ntBASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC136624.4-201ENST00000573044 370 ntBASIC5.97□□□□□ -1.45
CHD8Q9HCK8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 LINC01881-201ENST00000416103 412 ntBASIC5.97□□□□□ -1.45
CHD8Q9HCK8 RPL23AP85-201ENST00000421838 433 ntBASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC024558.1-201ENST00000505008 528 ntBASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 HMGB1P23-201ENST00000518743 568 ntBASIC5.97□□□□□ -1.45
CHD8Q9HCK8 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 AC087763.1-201ENST00000603391 286 ntBASIC5.97□□□□□ -1.45
CHD8Q9HCK8 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHD8Q9HCK8 WDR95P-201ENST00000425638 1542 ntBASIC5.97□□□□□ -1.45
CHD8Q9HCK8 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CHD8Q9HCK8 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
CHD8Q9HCK8 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CHD8Q9HCK8 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CHD8Q9HCK8 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
CHD8Q9HCK8 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
CHD8Q9HCK8 AC011592.1-201ENST00000624647 3634 ntBASIC5.96□□□□□ -1.45
CHD8Q9HCK8 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CHD8Q9HCK8 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AC005077.1-201ENST00000449226 375 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 IGBP1P5-201ENST00000507524 1000 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AC093824.1-201ENST00000508796 343 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AC074087.1-201ENST00000512059 724 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AC073869.10-201ENST00000642016 354 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 AL161756.3-201ENST00000641216 2071 ntBASIC5.96□□□□□ -1.46
CHD8Q9HCK8 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.96□□□□□ -1.46
CHD8Q9HCK8 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms