Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AKR1D1P1-201ENST00000457236 936 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 SCARNA5-201ENST00000516201 276 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC005519.1-201ENST00000554490 601 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC024589.2-201ENST00000605642 1294 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 MIR7854-201ENST00000620068 65 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 RAB28P4-201ENST00000622233 665 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.69□□□□□ -1.34
PCDH9Q9HC56 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH9Q9HC56 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AL669831.5-218ENST00000591702 1873 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 RBPJP6-201ENST00000411556 1431 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC023245.2-201ENST00000530760 2978 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC010894.1-201ENST00000313760 361 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 RNA5SP308-201ENST00000362532 115 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 SNORA7A-201ENST00000384765 139 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 ARSFP1-201ENST00000398758 477 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 RNA5SP251-201ENST00000410614 137 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC116036.1-201ENST00000412199 367 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 RPS21P8-201ENST00000413365 247 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 MTND4LP17-201ENST00000414607 293 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 NPM1P25-201ENST00000429734 854 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 HMGN1P26-201ENST00000558737 303 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC007066.2-202ENST00000566531 914 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 PRELID3BP3-201ENST00000584963 545 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 RPL29P33-201ENST00000587474 316 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC245052.7-201ENST00000601161 359 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC036176.3-201ENST00000602456 418 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AL137246.2-201ENST00000613439 662 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC087821.1-201ENST00000623639 567 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC073488.9-201ENST00000631601 754 ntBASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH9Q9HC56 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 PPIAP24-201ENST00000328558 471 ntBASIC6.67□□□□□ -1.34
PCDH9Q9HC56 RNA5SP155-201ENST00000411154 129 ntBASIC6.67□□□□□ -1.34
PCDH9Q9HC56 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH9Q9HC56 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms