Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL049536.1-201ENST00000625043 744 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AC079949.2-201ENST00000617117 2933 ntBASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CDK5RAP1Q96SZ6 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CDK5RAP1Q96SZ6 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
CDK5RAP1Q96SZ6 AL031651.1-201ENST00000615357 1438 ntBASIC7.09□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CDK5RAP1Q96SZ6 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
CDK5RAP1Q96SZ6 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CDK5RAP1Q96SZ6 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 MROH3P-201ENST00000435735 2676 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CIR1P2-201ENST00000514821 1342 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 Z97989.1-201ENST00000531702 2421 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CASC19-243ENST00000641588 1546 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 RPL12P13-201ENST00000310055 497 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 RNU1-5P-201ENST00000362684 144 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 RNU1-55P-201ENST00000365510 158 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 RNU6-584P-201ENST00000410350 95 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CDC42P6-201ENST00000421246 576 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AL590128.1-201ENST00000433407 286 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC114878.1-201ENST00000441166 358 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CRYGGP-201ENST00000443337 145 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 Z83846.1-201ENST00000446798 265 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 RN7SL393P-201ENST00000463588 296 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC074386.1-206ENST00000487102 761 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 RN7SL143P-201ENST00000496780 297 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC147055.1-201ENST00000509261 750 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC091849.1-201ENST00000509920 121 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC011352.2-201ENST00000514574 1016 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 RN7SKP196-201ENST00000516267 345 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 DUXAP5-201ENST00000529668 529 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 FXNP1-201ENST00000555153 337 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 OR4C49P-201ENST00000563891 900 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC005479.3-201ENST00000602790 431 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC012175.1-201ENST00000603755 531 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AL713998.2-201ENST00000604538 1198 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 FAM72A-208ENST00000607379 1139 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC009464.1-201ENST00000615731 469 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 U6.48-201ENST00000618523 106 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AL445984.1-201ENST00000637834 659 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms