Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CYCSP17-201ENST00000407870 315 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 RANP7-201ENST00000418085 644 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 TRIM60P13-201ENST00000432350 1283 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC017099.1-201ENST00000448261 1028 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 MEF2AP1-201ENST00000454867 863 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 RN7SL654P-201ENST00000479178 292 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC015524.1-201ENST00000491585 472 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC093878.1-201ENST00000515630 432 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC130364.2-201ENST00000528639 604 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC004232.1-201ENST00000571388 208 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AL023583.1-201ENST00000607518 1143 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC092701.1-201ENST00000623627 1551 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4CQ96CF2 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4CQ96CF2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4CQ96CF2 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4CQ96CF2 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4CQ96CF2 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4CQ96CF2 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4CQ96CF2 AC093278.2-201ENST00000564956 2485 ntBASIC8□□□□□ -1.13
CHMP4CQ96CF2 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 DOCK11P1-201ENST00000553480 5932 ntBASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 RPL12P23-201ENST00000405880 490 ntBASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 GAPDHP57-201ENST00000424400 585 ntBASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 ETF1P1-206ENST00000427296 984 ntBASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 PFN1P11-201ENST00000445829 389 ntBASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AL513343.1-201ENST00000451818 792 ntBASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 RN7SL187P-201ENST00000495587 303 ntBASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 OR9G2P-201ENST00000533326 880 ntBASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4CQ96CF2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 RACGAP1P-201ENST00000550663 1879 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 CCDC150P1-201ENST00000537123 2215 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 CDY10P-201ENST00000452415 1567 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 RNA5SP382-201ENST00000363355 112 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC239367.3-201ENST00000428996 814 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 MTND2P3-201ENST00000452458 470 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AL034369.1-201ENST00000453808 477 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 TPRKBP1-201ENST00000456243 481 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC089999.1-201ENST00000460336 374 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 DEFB109A-201ENST00000482450 265 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 RN7SL561P-201ENST00000488553 281 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 SNX18P23-201ENST00000510867 677 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC021146.10-201ENST00000515628 706 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 SETP17-201ENST00000534163 817 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC106785.4-201ENST00000569492 412 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 MIR4732-201ENST00000581873 76 ntBASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.98□□□□□ -1.13
CHMP4CQ96CF2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms