Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 HNRNPCP8-201ENST00000528764 888 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 HMGN2P47-201ENST00000559378 272 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 MIR378C-201ENST00000578683 81 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 RN7SL131P-201ENST00000579043 256 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 MIR4433B-201ENST00000581329 102 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AC084036.1-201ENST00000609190 508 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AC103564.3-201ENST00000621194 220 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AC012653.2-201ENST00000621880 420 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AC106782.7-201ENST00000624024 418 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 AC133555.5-201ENST00000624430 418 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 SNX18P10-201ENST00000625014 519 ntBASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LINC00346Q8IVM7 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 AC093844.1-201ENST00000514910 1361 ntBASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.9□□□□□ -1.47
LINC00346Q8IVM7 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 MAPK10-287ENST00000641217 3037 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 RN7SKP189-201ENST00000365042 330 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 RNA5SP474-201ENST00000391234 90 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 RNU1-56P-201ENST00000391303 164 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AL049697.3-201ENST00000406493 982 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 PPIAP23-201ENST00000420099 497 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 RPS7P12-201ENST00000422385 582 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 RPL31P20-201ENST00000449593 360 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC019084.1-201ENST00000457337 432 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AK4P6-201ENST00000505168 528 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC010442.1-201ENST00000515583 816 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 IGHV3-57-201ENST00000520143 280 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 CARSP2-201ENST00000520688 277 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 IGLV3-6-201ENST00000523937 250 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 SNRPCP6-201ENST00000528310 210 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AP001804.2-201ENST00000533932 910 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC006120.1-201ENST00000579375 546 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC067852.5-201ENST00000589299 310 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC245407.2-201ENST00000614199 451 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC009283.1-201ENST00000615852 645 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 MRPL57P3-201ENST00000619218 176 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 AC005858.3-201ENST00000624756 589 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 Z93929.1-201ENST00000418200 1475 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 CCDC150P1-201ENST00000537123 2215 ntBASIC5.89□□□□□ -1.47
LINC00346Q8IVM7 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LINC00346Q8IVM7 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LINC00346Q8IVM7 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LINC00346Q8IVM7 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LINC00346Q8IVM7 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LINC00346Q8IVM7 RNA5SP429-201ENST00000363688 109 ntBASIC5.88□□□□□ -1.47
LINC00346Q8IVM7 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms