Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 AL136531.3-201ENST00000624378 3658 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CX3CL1P78423 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CX3CL1P78423 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AL662795.2-201ENST00000624252 3706 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 RNU6-618P-201ENST00000363518 112 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 MRPL32P1-201ENST00000406301 247 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AL136100.1-201ENST00000407696 330 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 RPLP1P10-201ENST00000413972 339 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 RPL23AP18-201ENST00000416139 468 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AL713922.1-201ENST00000416477 747 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 GAPDHP57-201ENST00000424400 585 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 PAICSP2-201ENST00000429118 1150 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 RPS10P14-201ENST00000440748 502 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AL356133.1-201ENST00000444762 372 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 RPL7AP71-201ENST00000451120 739 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 RPL36AP55-201ENST00000454114 305 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AL133480.2-201ENST00000456723 487 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 EIF3LP2-201ENST00000457262 807 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CL1P78423 RPL23AP80-201ENST00000495605 424 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CL1P78423 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 COL6A4P2-205ENST00000509855 506 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AP005902.2-201ENST00000518393 307 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AP000662.1-201ENST00000530952 487 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CX3CL1P78423 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 NPM1P5-201ENST00000557228 838 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 MIR378H-201ENST00000579966 83 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CL1P78423 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CL1P78423 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AL078624.2-201ENST00000605063 554 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AC018690.1-201ENST00000608144 626 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AL445647.2-201ENST00000615170 130 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AP001885.1-201ENST00000621658 558 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AC120057.5-201ENST00000623840 154 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AC020923.1-201ENST00000624021 917 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 SNORA16A-202ENST00000628458 135 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CL1P78423 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CX3CL1P78423 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CX3CL1P78423 AC013488.1-201ENST00000526618 1838 ntBASIC5.39□□□□□ -1.55
CX3CL1P78423 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CL1P78423 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CL1P78423 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 HSPD1P1-201ENST00000503199 1726 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 ZNF806-201ENST00000438300 1774 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 CCAT2-201ENST00000630920 1752 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CX3CL1P78423 RNA5SP152-201ENST00000365184 110 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 MIR138-2-201ENST00000384916 84 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 MIR431-201ENST00000385266 114 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CX3CL1P78423 RNA5SP474-201ENST00000391234 90 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC098592.2-201ENST00000413158 265 ntBASIC5.38□□□□□ -1.55
CX3CL1P78423 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CL1P78423 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CL1P78423 EIF4A1P2-201ENST00000422633 1220 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms