Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC4.58□□□□□ -1.68
CKS1BP61024 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC4.58□□□□□ -1.68
CKS1BP61024 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.58□□□□□ -1.68
CKS1BP61024 OR4G1P-202ENST00000641173 1788 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.58□□□□□ -1.68
CKS1BP61024 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 AL356361.1-201ENST00000400943 1459 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC4.58□□□□□ -1.68
CKS1BP61024 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
CKS1BP61024 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 MIR614-201ENST00000385082 90 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 RN7SKP188-201ENST00000410789 317 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 RPS17P17-201ENST00000419392 409 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 TRGV5P-201ENST00000419915 354 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 LSM3P3-201ENST00000436601 306 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AC096632.2-201ENST00000438139 1239 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AC010240.2-201ENST00000445363 1205 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 WBP1LP1-201ENST00000460451 896 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC4.58□□□□□ -1.68
CKS1BP61024 RPL23AP8-201ENST00000479812 475 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AC096743.1-201ENST00000485172 319 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AC117392.1-201ENST00000487061 596 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 HNRNPA1P17-201ENST00000496620 924 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC106774.2-201ENST00000510266 406 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC4.58□□□□□ -1.68
CKS1BP61024 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 AP006587.5-201ENST00000532033 739 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC025252.2-201ENST00000537470 502 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 NXPE2P1-201ENST00000543705 726 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC4.58□□□□□ -1.68
CKS1BP61024 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
CKS1BP61024 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC018809.2-201ENST00000602436 3823 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 AP001554.1-201ENST00000604533 376 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 FAM74A6-203ENST00000615956 481 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 OR1N1-202ENST00000619659 939 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 AC004817.4-201ENST00000602396 3625 ntBASIC4.58□□□□□ -1.68
CKS1BP61024 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CKS1BP61024 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 TCP1P3-201ENST00000414406 1498 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 MAPK10-379ENST00000642013 1385 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 RNA5SP453-201ENST00000362503 119 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 RNU1-146P-201ENST00000364015 165 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 FAUP2-201ENST00000394301 401 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 HNRNPCP2-201ENST00000399515 881 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 CES5AP1-201ENST00000400418 859 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 AC116036.1-201ENST00000412199 367 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 AL663061.1-201ENST00000416625 580 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 VDAC1P10-201ENST00000416715 891 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 AF274573.1-201ENST00000430535 494 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 HBBP1-201ENST00000433329 439 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms