Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH13P55290 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH13P55290 AL121578.2-201ENST00000448797 447 ntBASIC6.33□□□□□ -1.4
CDH13P55290 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH13P55290 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH13P55290 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH13P55290 AC022206.1-201ENST00000495947 347 ntBASIC6.33□□□□□ -1.4
CDH13P55290 AC114940.1-201ENST00000512162 1265 ntBASIC6.33□□□□□ -1.4
CDH13P55290 AC096661.1-201ENST00000515870 822 ntBASIC6.33□□□□□ -1.4
CDH13P55290 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.33□□□□□ -1.4
CDH13P55290 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH13P55290 AC234775.3-201ENST00000564612 656 ntBASIC6.33□□□□□ -1.4
CDH13P55290 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH13P55290 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH13P55290 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH13P55290 NF1P10-201ENST00000613227 742 ntBASIC6.33□□□□□ -1.4
CDH13P55290 AL109924.4-201ENST00000623089 670 ntBASIC6.33□□□□□ -1.4
CDH13P55290 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CDH13P55290 AC006453.3-201ENST00000635891 377 ntBASIC6.33□□□□□ -1.4
CDH13P55290 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH13P55290 AC105235.1-201ENST00000623208 1816 ntBASIC6.33□□□□□ -1.4
CDH13P55290 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH13P55290 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH13P55290 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH13P55290 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH13P55290 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH13P55290 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH13P55290 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.33□□□□□ -1.4
CDH13P55290 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH13P55290 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH13P55290 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CDH13P55290 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH13P55290 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH13P55290 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CDH13P55290 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH13P55290 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH13P55290 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH13P55290 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDH13P55290 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CDH13P55290 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 RPL23AP18-201ENST00000416139 468 ntBASIC6.32□□□□□ -1.4
CDH13P55290 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 KATNBL1P2-201ENST00000433311 835 ntBASIC6.32□□□□□ -1.4
CDH13P55290 NPM1P48-201ENST00000436002 853 ntBASIC6.32□□□□□ -1.4
CDH13P55290 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH13P55290 AL157385.1-201ENST00000446973 268 ntBASIC6.32□□□□□ -1.4
CDH13P55290 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 OR7L1P-201ENST00000456181 380 ntBASIC6.32□□□□□ -1.4
CDH13P55290 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDH13P55290 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 IGHV1-14-201ENST00000523391 241 ntBASIC6.32□□□□□ -1.4
CDH13P55290 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH13P55290 RBMS2P1-201ENST00000525031 1226 ntBASIC6.32□□□□□ -1.4
CDH13P55290 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH13P55290 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH13P55290 TRAV11-201ENST00000539512 339 ntBASIC6.32□□□□□ -1.4
CDH13P55290 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH13P55290 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH13P55290 AC090286.3-201ENST00000573133 187 ntBASIC6.32□□□□□ -1.4
CDH13P55290 MTATP6P25-201ENST00000574491 261 ntBASIC6.32□□□□□ -1.4
CDH13P55290 FCGR1CP-201ENST00000579737 1127 ntBASIC6.32□□□□□ -1.4
CDH13P55290 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 FXYD6P1-201ENST00000604857 285 ntBASIC6.32□□□□□ -1.4
CDH13P55290 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.32□□□□□ -1.4
CDH13P55290 AC093635.1-201ENST00000609028 555 ntBASIC6.32□□□□□ -1.4
CDH13P55290 AL137000.1-201ENST00000610528 1244 ntBASIC6.32□□□□□ -1.4
CDH13P55290 AC018659.2-201ENST00000624690 715 ntBASIC6.32□□□□□ -1.4
CDH13P55290 AL049634.1-201ENST00000453770 1720 ntBASIC6.32□□□□□ -1.4
CDH13P55290 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH13P55290 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH13P55290 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDH13P55290 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDH13P55290 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
CDH13P55290 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH13P55290 CCDC150P1-201ENST00000537123 2215 ntBASIC6.31□□□□□ -1.4
CDH13P55290 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 AC139426.3-201ENST00000605648 2059 ntBASIC6.31□□□□□ -1.4
CDH13P55290 AC067942.1-201ENST00000488045 1493 ntBASIC6.31□□□□□ -1.4
CDH13P55290 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDH13P55290 PPIAP24-201ENST00000328558 471 ntBASIC6.31□□□□□ -1.4
CDH13P55290 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms