Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CDH6P55285 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
CDH6P55285 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH6P55285 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH6P55285 AC005702.3-201ENST00000585345 1447 ntBASIC6.68□□□□□ -1.34
CDH6P55285 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH6P55285 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH6P55285 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH6P55285 AC067942.1-201ENST00000488045 1493 ntBASIC6.68□□□□□ -1.34
CDH6P55285 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CDH6P55285 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CDH6P55285 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH6P55285 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.68□□□□□ -1.34
CDH6P55285 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.68□□□□□ -1.34
CDH6P55285 AL022324.2-201ENST00000434827 780 ntBASIC6.68□□□□□ -1.34
CDH6P55285 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 PPIAP32-201ENST00000449940 472 ntBASIC6.68□□□□□ -1.34
CDH6P55285 AL034369.1-201ENST00000453808 477 ntBASIC6.68□□□□□ -1.34
CDH6P55285 SNX18P26-201ENST00000458433 740 ntBASIC6.68□□□□□ -1.34
CDH6P55285 RN7SL502P-201ENST00000481857 290 ntBASIC6.68□□□□□ -1.34
CDH6P55285 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.68□□□□□ -1.34
CDH6P55285 FTH1P8-201ENST00000498161 514 ntBASIC6.68□□□□□ -1.34
CDH6P55285 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CDH6P55285 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.68□□□□□ -1.34
CDH6P55285 IGKV1D-22-201ENST00000518953 324 ntBASIC6.68□□□□□ -1.34
CDH6P55285 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.68□□□□□ -1.34
CDH6P55285 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH6P55285 AC133552.4-201ENST00000576103 676 ntBASIC6.68□□□□□ -1.34
CDH6P55285 AC090616.1-201ENST00000583895 447 ntBASIC6.68□□□□□ -1.34
CDH6P55285 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 AC024255.1-201ENST00000614376 102 ntBASIC6.68□□□□□ -1.34
CDH6P55285 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH6P55285 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.68□□□□□ -1.34
CDH6P55285 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH6P55285 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CDH6P55285 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 AC119674.1-213ENST00000641177 1386 ntBASIC6.68□□□□□ -1.34
CDH6P55285 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.68□□□□□ -1.34
CDH6P55285 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDH6P55285 SMG1P5-202ENST00000529428 4219 ntBASIC6.68□□□□□ -1.34
CDH6P55285 SMG1P2-201ENST00000566127 4221 ntBASIC6.68□□□□□ -1.34
CDH6P55285 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.67□□□□□ -1.34
CDH6P55285 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
CDH6P55285 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH6P55285 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH6P55285 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 RN7SKP281-201ENST00000410472 352 ntBASIC6.67□□□□□ -1.34
CDH6P55285 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH6P55285 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH6P55285 AC009237.1-201ENST00000442127 744 ntBASIC6.67□□□□□ -1.34
CDH6P55285 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 AL445991.1-201ENST00000450381 475 ntBASIC6.67□□□□□ -1.34
CDH6P55285 AC074386.1-206ENST00000487102 761 ntBASIC6.67□□□□□ -1.34
CDH6P55285 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH6P55285 AC139713.1-202ENST00000512366 460 ntBASIC6.67□□□□□ -1.34
CDH6P55285 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.67□□□□□ -1.34
CDH6P55285 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.67□□□□□ -1.34
CDH6P55285 SYPL1P2-201ENST00000582878 727 ntBASIC6.67□□□□□ -1.34
CDH6P55285 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.67□□□□□ -1.34
CDH6P55285 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH6P55285 AL008582.1-201ENST00000609612 442 ntBASIC6.67□□□□□ -1.34
CDH6P55285 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CDH6P55285 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.67□□□□□ -1.34
CDH6P55285 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CDH6P55285 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.67□□□□□ -1.34
CDH6P55285 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CDH6P55285 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDH6P55285 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.67□□□□□ -1.34
CDH6P55285 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH6P55285 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CDH6P55285 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
CDH6P55285 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CDH6P55285 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.66□□□□□ -1.34
CDH6P55285 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.66□□□□□ -1.34
CDH6P55285 RPL31P11-201ENST00000426558 1558 ntBASIC6.66□□□□□ -1.34
CDH6P55285 AC011369.2-201ENST00000624423 1567 ntBASIC6.66□□□□□ -1.34
CDH6P55285 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDH6P55285 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.66□□□□□ -1.34
CDH6P55285 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDH6P55285 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms