Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.57□□□□□ -1.36
LIMK2P53671 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LIMK2P53671 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LIMK2P53671 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LIMK2P53671 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 AC090181.3-201ENST00000624777 1514 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 SNORA38B-201ENST00000363524 131 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 SNORA64.3-201ENST00000365647 134 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
LIMK2P53671 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.56□□□□□ -1.36
LIMK2P53671 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMK2P53671 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMK2P53671 THEM7P-201ENST00000419556 672 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 PCNPP2-201ENST00000441651 455 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 GAPDHP37-201ENST00000442317 968 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 RN7SL568P-201ENST00000493069 298 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.56□□□□□ -1.36
LIMK2P53671 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.56□□□□□ -1.36
LIMK2P53671 AP005639.1-201ENST00000526939 192 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMK2P53671 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMK2P53671 AC023310.2-201ENST00000553844 547 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMK2P53671 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.56□□□□□ -1.36
LIMK2P53671 RPL29P33-201ENST00000587474 316 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMK2P53671 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.56□□□□□ -1.36
LIMK2P53671 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 AC068726.1-201ENST00000610993 341 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 AC061999.1-201ENST00000624454 177 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.56□□□□□ -1.36
LIMK2P53671 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.56□□□□□ -1.36
LIMK2P53671 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 AC006511.3-201ENST00000624929 1783 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.56□□□□□ -1.36
LIMK2P53671 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.56□□□□□ -1.36
LIMK2P53671 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.56□□□□□ -1.36
LIMK2P53671 PPBPP2-201ENST00000513150 1362 ntBASIC6.56□□□□□ -1.36
LIMK2P53671 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
LIMK2P53671 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMK2P53671 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.55□□□□□ -1.36
LIMK2P53671 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMK2P53671 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
LIMK2P53671 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
LIMK2P53671 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
LIMK2P53671 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMK2P53671 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMK2P53671 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMK2P53671 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.55□□□□□ -1.36
LIMK2P53671 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
LIMK2P53671 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
LIMK2P53671 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMK2P53671 RNA5SP85-201ENST00000365378 119 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 AL590635.1-201ENST00000406314 586 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 AL139184.1-202ENST00000422303 222 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.55□□□□□ -1.36
LIMK2P53671 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.55□□□□□ -1.36
LIMK2P53671 SNRPBP1-201ENST00000443634 282 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.55□□□□□ -1.36
LIMK2P53671 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.55□□□□□ -1.36
LIMK2P53671 AC236972.4-201ENST00000458091 963 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.55□□□□□ -1.36
LIMK2P53671 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMK2P53671 AL390198.2-201ENST00000510553 222 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 IGHV1-14-201ENST00000523391 241 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.55□□□□□ -1.36
LIMK2P53671 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.55□□□□□ -1.36
LIMK2P53671 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
LIMK2P53671 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMK2P53671 AL162632.2-201ENST00000553933 399 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 ANP32BP1-202ENST00000568553 737 ntBASIC6.55□□□□□ -1.36
LIMK2P53671 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMK2P53671 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
LIMK2P53671 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMK2P53671 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMK2P53671 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LIMK2P53671 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMK2P53671 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LIMK2P53671 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 RNA5SP350-201ENST00000363298 111 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 RN7SKP187-201ENST00000365536 330 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 SNORA70H-201ENST00000383910 135 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms