Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RNA5SP77-201ENST00000365394 120 ntBASIC7.3□□□□□ -1.24
CIITAP33076 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.3□□□□□ -1.24
CIITAP33076 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.3□□□□□ -1.24
CIITAP33076 AC017035.1-201ENST00000411999 1115 ntBASIC7.3□□□□□ -1.24
CIITAP33076 SMC4P1-201ENST00000414479 527 ntBASIC7.3□□□□□ -1.24
CIITAP33076 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CIITAP33076 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.3□□□□□ -1.24
CIITAP33076 AC096632.2-201ENST00000438139 1239 ntBASIC7.3□□□□□ -1.24
CIITAP33076 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.3□□□□□ -1.24
CIITAP33076 COX4I1P2-201ENST00000447446 547 ntBASIC7.3□□□□□ -1.24
CIITAP33076 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
CIITAP33076 RPL29P23-201ENST00000486188 442 ntBASIC7.3□□□□□ -1.24
CIITAP33076 AC022206.1-201ENST00000495947 347 ntBASIC7.3□□□□□ -1.24
CIITAP33076 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.3□□□□□ -1.24
CIITAP33076 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.3□□□□□ -1.24
CIITAP33076 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.3□□□□□ -1.24
CIITAP33076 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.3□□□□□ -1.24
CIITAP33076 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.3□□□□□ -1.24
CIITAP33076 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.3□□□□□ -1.24
CIITAP33076 AL078623.1-201ENST00000602702 907 ntBASIC7.3□□□□□ -1.24
CIITAP33076 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.3□□□□□ -1.24
CIITAP33076 AC010325.3-201ENST00000641084 394 ntBASIC7.3□□□□□ -1.24
CIITAP33076 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CIITAP33076 AC110716.2-201ENST00000563865 3945 ntBASIC7.3□□□□□ -1.24
CIITAP33076 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CIITAP33076 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.3□□□□□ -1.24
CIITAP33076 HCFC2P1-201ENST00000392864 1592 ntBASIC7.29□□□□□ -1.24
CIITAP33076 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CIITAP33076 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CIITAP33076 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CIITAP33076 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.29□□□□□ -1.24
CIITAP33076 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CIITAP33076 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.29□□□□□ -1.24
CIITAP33076 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CIITAP33076 DHFRP2-201ENST00000414224 547 ntBASIC7.29□□□□□ -1.24
CIITAP33076 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.29□□□□□ -1.24
CIITAP33076 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.29□□□□□ -1.24
CIITAP33076 FABP5P1-201ENST00000423401 411 ntBASIC7.29□□□□□ -1.24
CIITAP33076 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CIITAP33076 FABP5P2-201ENST00000439042 408 ntBASIC7.29□□□□□ -1.24
CIITAP33076 AC097359.1-201ENST00000447946 463 ntBASIC7.29□□□□□ -1.24
CIITAP33076 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.29□□□□□ -1.24
CIITAP33076 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 AC106822.1-201ENST00000502647 526 ntBASIC7.29□□□□□ -1.24
CIITAP33076 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.29□□□□□ -1.24
CIITAP33076 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.29□□□□□ -1.24
CIITAP33076 AC093816.1-201ENST00000515076 913 ntBASIC7.29□□□□□ -1.24
CIITAP33076 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.29□□□□□ -1.24
CIITAP33076 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CIITAP33076 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.29□□□□□ -1.24
CIITAP33076 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.29□□□□□ -1.24
CIITAP33076 AL157762.1-201ENST00000619612 415 ntBASIC7.29□□□□□ -1.24
CIITAP33076 AL450226.2-201ENST00000622913 439 ntBASIC7.29□□□□□ -1.24
CIITAP33076 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 AP002370.1-201ENST00000528055 1602 ntBASIC7.29□□□□□ -1.24
CIITAP33076 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.29□□□□□ -1.24
CIITAP33076 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.29□□□□□ -1.24
CIITAP33076 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
CIITAP33076 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CIITAP33076 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 AL031651.1-201ENST00000615357 1438 ntBASIC7.28□□□□□ -1.24
CIITAP33076 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CIITAP33076 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.28□□□□□ -1.24
CIITAP33076 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 SNORD16-201ENST00000362803 99 ntBASIC7.28□□□□□ -1.24
CIITAP33076 AC003045.1-201ENST00000398779 713 ntBASIC7.28□□□□□ -1.24
CIITAP33076 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.28□□□□□ -1.24
CIITAP33076 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.28□□□□□ -1.24
CIITAP33076 TPTE2P1-204ENST00000435256 593 ntBASIC7.28□□□□□ -1.24
CIITAP33076 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.28□□□□□ -1.24
CIITAP33076 RARRES2P3-201ENST00000457739 473 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms