Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.27□□□□□ -1.57
CCL3L1P16619 AL731556.1-201ENST00000394628 3711 ntBASIC5.27□□□□□ -1.57
CCL3L1P16619 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CCL3L1P16619 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCL3L1P16619 AC104162.1-201ENST00000430831 2382 ntBASIC5.27□□□□□ -1.57
CCL3L1P16619 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCL3L1P16619 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCL3L1P16619 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCL3L1P16619 OLMALINC-203ENST00000641087 3779 ntBASIC5.27□□□□□ -1.57
CCL3L1P16619 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC005034.3-201ENST00000604845 1747 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC125238.2-201ENST00000430003 1440 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AC011455.2-201ENST00000599320 3336 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC105235.1-201ENST00000623208 1816 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 RPL11P4-201ENST00000332269 436 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 PRELID1P1-201ENST00000403549 660 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.26□□□□□ -1.57
CCL3L1P16619 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC002127.1-201ENST00000421305 225 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 RPL7AP51-201ENST00000422016 760 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.26□□□□□ -1.57
CCL3L1P16619 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.26□□□□□ -1.57
CCL3L1P16619 ARMC4P1-201ENST00000438905 707 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC068522.1-201ENST00000482895 345 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC023818.1-201ENST00000498379 384 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AC106800.3-201ENST00000511389 308 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC116917.1-201ENST00000520558 305 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 AP001000.1-201ENST00000526843 742 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC073916.1-201ENST00000545095 130 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.26□□□□□ -1.57
CCL3L1P16619 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AL008723.3-201ENST00000608926 449 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AC024255.1-201ENST00000614376 102 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AC048341.3-201ENST00000619323 491 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 AL122023.1-201ENST00000622847 530 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 SAMMSON-214ENST00000641395 1264 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 OR6M2P-202ENST00000641780 2063 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCL3L1P16619 AL589993.1-201ENST00000407450 2524 ntBASIC5.26□□□□□ -1.57
CCL3L1P16619 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.26□□□□□ -1.57
CCL3L1P16619 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CCL3L1P16619 AC008957.3-201ENST00000624112 2242 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 AC079753.1-201ENST00000623243 3868 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 AC009779.8-201ENST00000641684 4384 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.25□□□□□ -1.57
CCL3L1P16619 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.25□□□□□ -1.57
CCL3L1P16619 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.25□□□□□ -1.57
CCL3L1P16619 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.25□□□□□ -1.57
CCL3L1P16619 RNA5SP350-201ENST00000363298 111 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.25□□□□□ -1.57
CCL3L1P16619 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 AL139184.1-202ENST00000422303 222 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 OSTCP4-201ENST00000424397 449 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.25□□□□□ -1.57
CCL3L1P16619 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.25□□□□□ -1.57
CCL3L1P16619 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.25□□□□□ -1.57
CCL3L1P16619 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.25□□□□□ -1.57
CCL3L1P16619 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.25□□□□□ -1.57
CCL3L1P16619 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.25□□□□□ -1.57
CCL3L1P16619 AC117500.1-201ENST00000497352 755 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.25□□□□□ -1.57
CCL3L1P16619 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.25□□□□□ -1.57
CCL3L1P16619 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.25□□□□□ -1.57
CCL3L1P16619 AC233702.7-202ENST00000582941 211 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 WBP1LP12-201ENST00000604449 331 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 AC011891.2-201ENST00000604949 397 ntBASIC5.25□□□□□ -1.57
CCL3L1P16619 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.25□□□□□ -1.57
CCL3L1P16619 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCL3L1P16619 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms