Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC009299.1-201ENST00000429684 717 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AL606490.7-201ENST00000433136 191 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 AC108039.2-201ENST00000440214 359 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 AL591379.2-201ENST00000450223 397 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AC090589.1-201ENST00000473109 362 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 RN7SL152P-201ENST00000484176 298 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 EEF1B2P2-201ENST00000519625 676 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 ATP5J2P4-201ENST00000538774 267 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 COX6CP11-201ENST00000555293 229 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 AC044860.3-201ENST00000559957 368 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AC145350.1-201ENST00000567426 208 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.01□□□□□ -1.29
COL6A2P12110 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.01□□□□□ -1.29
COL6A2P12110 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 AL049844.2-201ENST00000604280 628 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 RNU4-5P-201ENST00000607255 135 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 AC092954.1-201ENST00000609121 445 ntBASIC7.01□□□□□ -1.29
COL6A2P12110 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.01□□□□□ -1.29
COL6A2P12110 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL6A2P12110 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL6A2P12110 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL6A2P12110 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7□□□□□ -1.29
COL6A2P12110 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL6A2P12110 FOLH1B-202ENST00000529567 2145 ntBASIC7□□□□□ -1.29
COL6A2P12110 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 TPTE2P2-201ENST00000403471 1466 ntBASIC7□□□□□ -1.29
COL6A2P12110 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 RNU6-1331P-201ENST00000363658 106 ntBASIC7□□□□□ -1.29
COL6A2P12110 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7□□□□□ -1.29
COL6A2P12110 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 RNU6-468P-201ENST00000384003 109 ntBASIC7□□□□□ -1.29
COL6A2P12110 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 OR7E91P-201ENST00000400027 866 ntBASIC7□□□□□ -1.29
COL6A2P12110 IFNA12P-201ENST00000413147 571 ntBASIC7□□□□□ -1.29
COL6A2P12110 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7□□□□□ -1.29
COL6A2P12110 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC7□□□□□ -1.29
COL6A2P12110 CLCN3P1-201ENST00000423965 1017 ntBASIC7□□□□□ -1.29
COL6A2P12110 MED15P9-201ENST00000424716 533 ntBASIC7□□□□□ -1.29
COL6A2P12110 TXNL1P1-201ENST00000429528 554 ntBASIC7□□□□□ -1.29
COL6A2P12110 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 RPS6P15-201ENST00000431996 751 ntBASIC7□□□□□ -1.29
COL6A2P12110 FDPSP8-201ENST00000438304 1089 ntBASIC7□□□□□ -1.29
COL6A2P12110 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7□□□□□ -1.29
COL6A2P12110 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL6A2P12110 MTCO1P53-201ENST00000441633 699 ntBASIC7□□□□□ -1.29
COL6A2P12110 SDHCP3-201ENST00000445371 506 ntBASIC7□□□□□ -1.29
COL6A2P12110 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7□□□□□ -1.29
COL6A2P12110 RN7SL58P-201ENST00000473445 294 ntBASIC7□□□□□ -1.29
COL6A2P12110 RN7SL259P-201ENST00000478499 253 ntBASIC7□□□□□ -1.29
COL6A2P12110 AP000563.1-201ENST00000490865 758 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7□□□□□ -1.29
COL6A2P12110 AC021146.11-201ENST00000503319 491 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7□□□□□ -1.29
COL6A2P12110 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7□□□□□ -1.29
COL6A2P12110 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7□□□□□ -1.29
COL6A2P12110 NOP56P3-201ENST00000549457 385 ntBASIC7□□□□□ -1.29
COL6A2P12110 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COL6A2P12110 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7□□□□□ -1.29
COL6A2P12110 AC243312.1-201ENST00000570582 275 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC008088.1-201ENST00000580993 280 ntBASIC7□□□□□ -1.29
COL6A2P12110 MIR3689C-201ENST00000581239 72 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC087575.1-201ENST00000585087 229 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC146944.4-201ENST00000602697 718 ntBASIC7□□□□□ -1.29
COL6A2P12110 GAS5-AS1-201ENST00000602767 694 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC069304.3-201ENST00000603938 1084 ntBASIC7□□□□□ -1.29
COL6A2P12110 AL109936.2-201ENST00000605350 650 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC012557.2-201ENST00000605919 418 ntBASIC7□□□□□ -1.29
COL6A2P12110 AC080013.6-201ENST00000606185 215 ntBASIC7□□□□□ -1.29
COL6A2P12110 AL513218.1-201ENST00000606527 391 ntBASIC7□□□□□ -1.29
COL6A2P12110 MIR6829-201ENST00000620375 67 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms