Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 MTND3P3-201ENST00000505004 126 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 ZNF519P4-201ENST00000514008 125 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 SETP12-201ENST00000514068 805 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC005363.1-201ENST00000530779 351 ntBASIC7.67□□□□□ -1.18
HLA-DOAP06340 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-DOAP06340 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-DOAP06340 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AL359195.2-201ENST00000623657 4412 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AL139805.1-201ENST00000407837 289 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 FAM204CP-201ENST00000424489 642 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 EIF2S2P3-201ENST00000428356 999 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 PMS2P9-201ENST00000441237 515 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 GTF2IP14-201ENST00000441415 586 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 HMGB1P7-201ENST00000450921 612 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 SNX18P25-201ENST00000510539 758 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AL078623.1-201ENST00000602702 907 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 RPSAP75-201ENST00000605848 301 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AL354696.1-201ENST00000614652 497 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 MRPL57P1-201ENST00000621486 265 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC012653.2-201ENST00000621880 420 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC073592.7-201ENST00000623659 507 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC020923.1-201ENST00000624021 917 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC020978.9-201ENST00000624380 1141 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AL356094.1-201ENST00000624663 1212 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AL357140.4-201ENST00000636827 412 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 IFIT1P1-201ENST00000400497 1449 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC125238.2-201ENST00000430003 1440 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 SAGE3P-201ENST00000619800 1635 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 SPATA31C1-201ENST00000420021 3895 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 AC010329.1-201ENST00000593903 8328 ntBASIC7.66□□□□□ -1.18
HLA-DOAP06340 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-DOAP06340 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-DOAP06340 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 STAG3L4-201ENST00000352103 530 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms