Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPL7P58-201ENST00000402913 758 ntBASIC6.83□□□□□ -1.32
APOEP02649 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.83□□□□□ -1.32
APOEP02649 LDHAP2-201ENST00000437325 985 ntBASIC6.83□□□□□ -1.32
APOEP02649 RPL12P49-201ENST00000441100 121 ntBASIC6.83□□□□□ -1.32
APOEP02649 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.83□□□□□ -1.32
APOEP02649 AC004890.1-201ENST00000461005 181 ntBASIC6.83□□□□□ -1.32
APOEP02649 RPL19P11-201ENST00000495944 589 ntBASIC6.83□□□□□ -1.32
APOEP02649 AC083906.1-201ENST00000509298 406 ntBASIC6.83□□□□□ -1.32
APOEP02649 AC138517.1-201ENST00000515724 568 ntBASIC6.83□□□□□ -1.32
APOEP02649 IGLV3-6-201ENST00000523937 250 ntBASIC6.83□□□□□ -1.32
APOEP02649 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.83□□□□□ -1.32
APOEP02649 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.83□□□□□ -1.32
APOEP02649 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.83□□□□□ -1.32
APOEP02649 SYPL1P2-201ENST00000582878 727 ntBASIC6.83□□□□□ -1.32
APOEP02649 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.83□□□□□ -1.32
APOEP02649 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.83□□□□□ -1.32
APOEP02649 BUB1P1-201ENST00000603541 607 ntBASIC6.83□□□□□ -1.32
APOEP02649 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.83□□□□□ -1.32
APOEP02649 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.83□□□□□ -1.32
APOEP02649 AC244100.4-201ENST00000617747 388 ntBASIC6.83□□□□□ -1.32
APOEP02649 AC005393.1-201ENST00000617916 584 ntBASIC6.83□□□□□ -1.32
APOEP02649 AC114546.4-201ENST00000624413 369 ntBASIC6.83□□□□□ -1.32
APOEP02649 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.83□□□□□ -1.32
APOEP02649 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
APOEP02649 CASC19-228ENST00000641414 1684 ntBASIC6.83□□□□□ -1.32
APOEP02649 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.83□□□□□ -1.32
APOEP02649 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.83□□□□□ -1.32
APOEP02649 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
APOEP02649 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.83□□□□□ -1.32
APOEP02649 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.83□□□□□ -1.32
APOEP02649 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.83□□□□□ -1.32
APOEP02649 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.83□□□□□ -1.32
APOEP02649 MAPK10-261ENST00000641050 3109 ntBASIC6.83□□□□□ -1.32
APOEP02649 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
APOEP02649 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
APOEP02649 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.82□□□□□ -1.32
APOEP02649 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.82□□□□□ -1.32
APOEP02649 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.82□□□□□ -1.32
APOEP02649 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
APOEP02649 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
APOEP02649 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
APOEP02649 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
APOEP02649 AC245036.1-201ENST00000391727 309 ntBASIC6.82□□□□□ -1.32
APOEP02649 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.82□□□□□ -1.32
APOEP02649 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
APOEP02649 AL451136.1-201ENST00000435399 325 ntBASIC6.82□□□□□ -1.32
APOEP02649 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.82□□□□□ -1.32
APOEP02649 AC245291.3-201ENST00000443400 292 ntBASIC6.82□□□□□ -1.32
APOEP02649 KF459542.1-201ENST00000450908 553 ntBASIC6.82□□□□□ -1.32
APOEP02649 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
APOEP02649 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.82□□□□□ -1.32
APOEP02649 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
APOEP02649 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.82□□□□□ -1.32
APOEP02649 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.82□□□□□ -1.32
APOEP02649 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
APOEP02649 NACAP5-201ENST00000509863 636 ntBASIC6.82□□□□□ -1.32
APOEP02649 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.82□□□□□ -1.32
APOEP02649 SCARNA5-201ENST00000516201 276 ntBASIC6.82□□□□□ -1.32
APOEP02649 IGHV3-57-201ENST00000520143 280 ntBASIC6.82□□□□□ -1.32
APOEP02649 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.82□□□□□ -1.32
APOEP02649 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.82□□□□□ -1.32
APOEP02649 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.82□□□□□ -1.32
APOEP02649 AC026956.1-201ENST00000558741 396 ntBASIC6.82□□□□□ -1.32
APOEP02649 MIR3157-201ENST00000578688 85 ntBASIC6.82□□□□□ -1.32
APOEP02649 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.82□□□□□ -1.32
APOEP02649 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.82□□□□□ -1.32
APOEP02649 AC012653.2-201ENST00000621880 420 ntBASIC6.82□□□□□ -1.32
APOEP02649 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
APOEP02649 AC073488.9-201ENST00000631601 754 ntBASIC6.82□□□□□ -1.32
APOEP02649 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.82□□□□□ -1.32
APOEP02649 OLMALINC-203ENST00000641087 3779 ntBASIC6.82□□□□□ -1.32
APOEP02649 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
APOEP02649 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.82□□□□□ -1.32
APOEP02649 AC018765.1-201ENST00000623357 3446 ntBASIC6.82□□□□□ -1.32
APOEP02649 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
APOEP02649 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
APOEP02649 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
APOEP02649 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 AC022613.3-201ENST00000560740 1346 ntBASIC6.81□□□□□ -1.32
APOEP02649 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
APOEP02649 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 RNA5SP85-201ENST00000365378 119 ntBASIC6.81□□□□□ -1.32
APOEP02649 MIR191-201ENST00000384873 92 ntBASIC6.81□□□□□ -1.32
APOEP02649 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.81□□□□□ -1.32
APOEP02649 RNU4-64P-201ENST00000410795 131 ntBASIC6.81□□□□□ -1.32
APOEP02649 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 GPN3P1-201ENST00000423883 535 ntBASIC6.81□□□□□ -1.32
APOEP02649 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.81□□□□□ -1.32
APOEP02649 AC128677.1-201ENST00000436016 442 ntBASIC6.81□□□□□ -1.32
APOEP02649 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 AC092601.1-201ENST00000444526 383 ntBASIC6.81□□□□□ -1.32
APOEP02649 AC099670.1-201ENST00000455141 783 ntBASIC6.81□□□□□ -1.32
APOEP02649 RBMY2HP-201ENST00000457961 720 ntBASIC6.81□□□□□ -1.32
APOEP02649 RPL23AP68-201ENST00000480924 445 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms