Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
UBE4BO95155 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
UBE4BO95155 AL353743.3-201ENST00000442109 1468 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
UBE4BO95155 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
UBE4BO95155 AC073342.2-201ENST00000595842 1800 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.06□□□□□ -1.28
UBE4BO95155 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
UBE4BO95155 MAPK10-287ENST00000641217 3037 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.06□□□□□ -1.28
UBE4BO95155 TMEM75-201ENST00000624314 2165 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UBE4BO95155 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.06□□□□□ -1.28
UBE4BO95155 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
UBE4BO95155 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.05□□□□□ -1.28
UBE4BO95155 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.05□□□□□ -1.28
UBE4BO95155 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.05□□□□□ -1.28
UBE4BO95155 Z93929.1-201ENST00000418200 1475 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
UBE4BO95155 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
UBE4BO95155 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 RN7SKP281-201ENST00000410472 352 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.05□□□□□ -1.28
UBE4BO95155 GPN3P1-201ENST00000423883 535 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 AL157884.1-201ENST00000424561 454 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 OR6R1P-201ENST00000431838 940 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.05□□□□□ -1.28
UBE4BO95155 AC128677.1-201ENST00000436016 442 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 AL355355.1-201ENST00000442900 793 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.05□□□□□ -1.28
UBE4BO95155 RN7SL741P-201ENST00000482473 289 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 AC093664.1-201ENST00000511779 289 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.05□□□□□ -1.28
UBE4BO95155 RPL41P2-201ENST00000544920 409 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 AC009729.1-201ENST00000548873 1133 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 BMS1P16-201ENST00000556075 1147 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.05□□□□□ -1.28
UBE4BO95155 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.05□□□□□ -1.28
UBE4BO95155 AC024267.2-201ENST00000582737 417 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.05□□□□□ -1.28
UBE4BO95155 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.05□□□□□ -1.28
UBE4BO95155 AC008957.3-201ENST00000624112 2242 ntBASIC7.05□□□□□ -1.28
UBE4BO95155 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.05□□□□□ -1.28
UBE4BO95155 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.05□□□□□ -1.28
UBE4BO95155 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.05□□□□□ -1.28
UBE4BO95155 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
UBE4BO95155 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.05□□□□□ -1.28
UBE4BO95155 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
UBE4BO95155 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 RN7SKP161-201ENST00000411110 305 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 AC002127.1-201ENST00000421305 225 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 GAPDHP19-201ENST00000431768 1005 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 AL031681.1-201ENST00000443304 400 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.04□□□□□ -1.28
UBE4BO95155 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
UBE4BO95155 AC015524.1-201ENST00000491585 472 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 MRPL57P6-201ENST00000506570 309 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.04□□□□□ -1.28
UBE4BO95155 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.04□□□□□ -1.28
UBE4BO95155 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.04□□□□□ -1.28
UBE4BO95155 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.04□□□□□ -1.28
UBE4BO95155 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.04□□□□□ -1.28
UBE4BO95155 AC009120.3-201ENST00000563335 499 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 MIR3157-201ENST00000578688 85 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.04□□□□□ -1.28
UBE4BO95155 AC026898.1-201ENST00000586404 571 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.04□□□□□ -1.28
UBE4BO95155 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.04□□□□□ -1.28
UBE4BO95155 AC073046.2-201ENST00000604756 527 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 AC068726.1-201ENST00000610993 341 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 HTR1DP1-201ENST00000616500 888 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 MIR6813-201ENST00000621638 56 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 AC011369.2-201ENST00000624423 1567 ntBASIC7.04□□□□□ -1.28
UBE4BO95155 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.04□□□□□ -1.28
UBE4BO95155 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
UBE4BO95155 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.04□□□□□ -1.28
UBE4BO95155 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.04□□□□□ -1.28
UBE4BO95155 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms