Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AL713922.1-201ENST00000416477 747 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC097359.1-201ENST00000447946 463 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 RARRES2P3-201ENST00000457739 473 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 MARK2P8-201ENST00000476069 952 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC106822.1-201ENST00000502647 526 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC124891.1-201ENST00000536322 519 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 RPL41P2-201ENST00000544920 409 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC018558.5-201ENST00000565840 952 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC106785.4-201ENST00000569492 412 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AL589765.6-201ENST00000601909 549 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 uc_338.29-201ENST00000615099 168 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 AC087392.3-202ENST00000358446 1754 ntBASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CLIP2Q9UDT6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 EEF1B2P3-201ENST00000447718 678 ntBASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 AC137695.1-201ENST00000604126 489 ntBASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 AC005277.2-201ENST00000617898 390 ntBASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLIP2Q9UDT6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AC005702.3-201ENST00000585345 1447 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 RNA5SP485-201ENST00000365053 119 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 RNU1-84P-201ENST00000365447 164 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AL049697.3-201ENST00000406493 982 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AL359885.1-201ENST00000415786 903 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 RN7SL168P-201ENST00000463821 279 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 RN7SL561P-201ENST00000488553 281 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 RPL19P11-201ENST00000495944 589 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 MTND6P8-201ENST00000503471 522 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AC008429.2-201ENST00000523057 864 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AC023310.2-201ENST00000553844 547 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 SYPL1P2-201ENST00000582878 727 ntBASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLIP2Q9UDT6 MTCO1P25-201ENST00000414449 1799 ntBASIC7.71□□□□□ -1.17
CLIP2Q9UDT6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms