Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 AC007068.2-201ENST00000543168 395 ntBASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 AP001264.1-201ENST00000620602 703 ntBASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 AC114546.4-201ENST00000624413 369 ntBASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 AC083837.1-201ENST00000565297 2994 ntBASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC50Q8IVM0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC092701.1-201ENST00000623627 1551 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC011369.2-201ENST00000624423 1567 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 RNU1-59P-201ENST00000364829 162 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 CCNJP2-201ENST00000457810 1163 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 RPL23AP64-201ENST00000469465 435 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC008868.1-201ENST00000509786 737 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC114940.1-201ENST00000512162 1265 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 IGHV1-14-201ENST00000523391 241 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 RBM7-208ENST00000545678 867 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AP003115.1-201ENST00000569849 463 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 RN7SL426P-201ENST00000579106 295 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 MIR4312-201ENST00000579909 76 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 U1.25-201ENST00000614085 162 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 U1.34-201ENST00000618578 162 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 U1.31-201ENST00000620022 160 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AL035425.4-201ENST00000624509 1063 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 AC089998.1-201ENST00000548575 3141 ntBASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC50Q8IVM0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.84□□□□□ -1.32
CCDC50Q8IVM0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC50Q8IVM0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC50Q8IVM0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.84□□□□□ -1.32
CCDC50Q8IVM0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 RNA5SP321-201ENST00000362722 111 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 EEF1GP6-201ENST00000402309 905 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC116036.1-201ENST00000412199 367 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 YWHAZP5-201ENST00000419975 730 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 CHCHD4P5-201ENST00000436684 427 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 BX679664.2-201ENST00000439282 283 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC091965.3-201ENST00000506236 208 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 MRPL57P6-201ENST00000506570 309 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC008429.2-201ENST00000523057 864 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 FXYD6P1-201ENST00000604857 285 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AL132640.3-201ENST00000630473 177 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms