Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RPL39P62891 AL096800.1-201ENST00000405326 893 ntBASIC4.44□□□□□ -1.7
RPL39P62891 RN7SKP151-201ENST00000410230 316 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC4.44□□□□□ -1.7
RPL39P62891 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.44□□□□□ -1.7
RPL39P62891 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC4.44□□□□□ -1.7
RPL39P62891 AC114402.2-201ENST00000432760 643 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AC007790.1-201ENST00000439081 782 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.44□□□□□ -1.7
RPL39P62891 GAPDHP33-201ENST00000443168 1013 ntBASIC4.44□□□□□ -1.7
RPL39P62891 GAPDHP20-201ENST00000444107 1007 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC4.44□□□□□ -1.7
RPL39P62891 VPS25P1-201ENST00000455691 508 ntBASIC4.44□□□□□ -1.7
RPL39P62891 RN7SL263P-201ENST00000467969 290 ntBASIC4.44□□□□□ -1.7
RPL39P62891 TUBBP11-201ENST00000472255 252 ntBASIC4.44□□□□□ -1.7
RPL39P62891 RN7SL37P-201ENST00000490461 307 ntBASIC4.44□□□□□ -1.7
RPL39P62891 RN7SL314P-201ENST00000490735 292 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AL035690.1-201ENST00000490892 383 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AC139272.1-201ENST00000505516 640 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AC131392.1-201ENST00000506490 633 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.44□□□□□ -1.7
RPL39P62891 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.44□□□□□ -1.7
RPL39P62891 SCARNA5-201ENST00000516201 276 ntBASIC4.44□□□□□ -1.7
RPL39P62891 RNA5SP318-201ENST00000516352 92 ntBASIC4.44□□□□□ -1.7
RPL39P62891 IGKV2-19-201ENST00000518132 283 ntBASIC4.44□□□□□ -1.7
RPL39P62891 COX6B1P4-201ENST00000519826 484 ntBASIC4.44□□□□□ -1.7
RPL39P62891 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.44□□□□□ -1.7
RPL39P62891 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.44□□□□□ -1.7
RPL39P62891 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.44□□□□□ -1.7
RPL39P62891 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC4.44□□□□□ -1.7
RPL39P62891 AC090616.1-201ENST00000583895 447 ntBASIC4.44□□□□□ -1.7
RPL39P62891 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC4.44□□□□□ -1.7
RPL39P62891 AC027334.1-201ENST00000603257 310 ntBASIC4.44□□□□□ -1.7
RPL39P62891 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.44□□□□□ -1.7
RPL39P62891 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC4.44□□□□□ -1.7
RPL39P62891 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.44□□□□□ -1.7
RPL39P62891 MIR665-201ENST00000635949 72 ntBASIC4.44□□□□□ -1.7
RPL39P62891 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RPL39P62891 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPL39P62891 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC4.44□□□□□ -1.7
RPL39P62891 AC098614.1-202ENST00000634895 1830 ntBASIC4.44□□□□□ -1.7
RPL39P62891 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RPL39P62891 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.44□□□□□ -1.7
RPL39P62891 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.43□□□□□ -1.7
RPL39P62891 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.43□□□□□ -1.7
RPL39P62891 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.43□□□□□ -1.7
RPL39P62891 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC4.43□□□□□ -1.7
RPL39P62891 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 NPM1P31-201ENST00000399021 764 ntBASIC4.43□□□□□ -1.7
RPL39P62891 RPL7P58-201ENST00000402913 758 ntBASIC4.43□□□□□ -1.7
RPL39P62891 RPSAP44-201ENST00000406712 884 ntBASIC4.43□□□□□ -1.7
RPL39P62891 RN7SKP129-201ENST00000410288 299 ntBASIC4.43□□□□□ -1.7
RPL39P62891 AC017035.1-201ENST00000411999 1115 ntBASIC4.43□□□□□ -1.7
RPL39P62891 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.43□□□□□ -1.7
RPL39P62891 ST13P21-201ENST00000453250 1098 ntBASIC4.43□□□□□ -1.7
RPL39P62891 AC112187.1-201ENST00000455837 479 ntBASIC4.43□□□□□ -1.7
RPL39P62891 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC4.43□□□□□ -1.7
RPL39P62891 AC090058.1-201ENST00000498788 435 ntBASIC4.43□□□□□ -1.7
RPL39P62891 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 AC008945.1-201ENST00000505144 499 ntBASIC4.43□□□□□ -1.7
RPL39P62891 Z99943.2-201ENST00000507585 266 ntBASIC4.43□□□□□ -1.7
RPL39P62891 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPL39P62891 MIR4800-201ENST00000537353 80 ntBASIC4.43□□□□□ -1.7
RPL39P62891 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.43□□□□□ -1.7
RPL39P62891 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC4.43□□□□□ -1.7
RPL39P62891 AL132640.2-202ENST00000559732 614 ntBASIC4.43□□□□□ -1.7
RPL39P62891 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC4.43□□□□□ -1.7
RPL39P62891 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC4.43□□□□□ -1.7
RPL39P62891 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.43□□□□□ -1.7
RPL39P62891 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC4.43□□□□□ -1.7
RPL39P62891 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC4.43□□□□□ -1.7
RPL39P62891 AC091133.5-201ENST00000603088 301 ntBASIC4.43□□□□□ -1.7
RPL39P62891 PRR13P3-201ENST00000603578 376 ntBASIC4.43□□□□□ -1.7
RPL39P62891 SNORD96A-201ENST00000606577 79 ntBASIC4.43□□□□□ -1.7
RPL39P62891 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.43□□□□□ -1.7
RPL39P62891 AC003992.1-201ENST00000635364 557 ntBASIC4.43□□□□□ -1.7
RPL39P62891 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RPL39P62891 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms