Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 CYCSP52-201ENST00000422857 310 ntBASIC5.33□□□□□ -1.56
LMO4P61968 RPL7AP14-201ENST00000424041 802 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 AC069154.1-201ENST00000432914 542 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AC094019.1-201ENST00000434678 472 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 RPS10P18-201ENST00000442662 495 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 RN7SL643P-201ENST00000471845 291 ntBASIC5.33□□□□□ -1.56
LMO4P61968 RPL12P31-201ENST00000478433 450 ntBASIC5.33□□□□□ -1.56
LMO4P61968 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 RN7SL104P-201ENST00000498686 293 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 RNU6-964P-201ENST00000516524 69 ntBASIC5.33□□□□□ -1.56
LMO4P61968 OR4A13P-201ENST00000529316 942 ntBASIC5.33□□□□□ -1.56
LMO4P61968 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.33□□□□□ -1.56
LMO4P61968 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 RN7SL366P-201ENST00000577957 292 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.33□□□□□ -1.56
LMO4P61968 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 GLYATL1P2-202ENST00000588046 902 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 PCA3_2.1-201ENST00000612507 409 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 RN7SL261P-201ENST00000613441 282 ntBASIC5.33□□□□□ -1.56
LMO4P61968 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.33□□□□□ -1.56
LMO4P61968 MIR6861-201ENST00000618657 64 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AC073488.6-201ENST00000632293 754 ntBASIC5.33□□□□□ -1.56
LMO4P61968 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 AP002833.3-201ENST00000625075 2265 ntBASIC5.33□□□□□ -1.56
LMO4P61968 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 AL596244.1-201ENST00000567068 3779 ntBASIC5.33□□□□□ -1.56
LMO4P61968 OR2AH1P-202ENST00000641232 2744 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AP003119.3-201ENST00000566747 4192 ntBASIC5.33□□□□□ -1.56
LMO4P61968 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LMO4P61968 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 CLCA3P-203ENST00000490028 2781 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AC011592.1-201ENST00000624647 3634 ntBASIC5.33□□□□□ -1.56
LMO4P61968 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 AC083806.2-201ENST00000617795 2685 ntBASIC5.32□□□□□ -1.56
LMO4P61968 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.32□□□□□ -1.56
LMO4P61968 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 AC062022.1-201ENST00000451026 1684 ntBASIC5.32□□□□□ -1.56
LMO4P61968 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
LMO4P61968 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LMO4P61968 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 SNORD16-201ENST00000362803 99 ntBASIC5.32□□□□□ -1.56
LMO4P61968 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
LMO4P61968 RN7SKP108-201ENST00000411367 328 ntBASIC5.32□□□□□ -1.56
LMO4P61968 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.32□□□□□ -1.56
LMO4P61968 AL157884.1-201ENST00000424561 454 ntBASIC5.32□□□□□ -1.56
LMO4P61968 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.32□□□□□ -1.56
LMO4P61968 AC115283.1-201ENST00000427353 400 ntBASIC5.32□□□□□ -1.56
LMO4P61968 AC110602.1-201ENST00000437414 318 ntBASIC5.32□□□□□ -1.56
LMO4P61968 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC5.32□□□□□ -1.56
LMO4P61968 AL645936.1-201ENST00000441979 518 ntBASIC5.32□□□□□ -1.56
LMO4P61968 AC010240.2-201ENST00000445363 1205 ntBASIC5.32□□□□□ -1.56
LMO4P61968 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 CEACAMP5-201ENST00000448037 961 ntBASIC5.32□□□□□ -1.56
LMO4P61968 AC144530.1-201ENST00000452862 555 ntBASIC5.32□□□□□ -1.56
LMO4P61968 AL139156.3-201ENST00000454802 394 ntBASIC5.32□□□□□ -1.56
LMO4P61968 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.32□□□□□ -1.56
LMO4P61968 AP002453.1-201ENST00000492327 668 ntBASIC5.32□□□□□ -1.56
LMO4P61968 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.32□□□□□ -1.56
LMO4P61968 KHDC1P1-201ENST00000511053 508 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms