Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NEK2P2-201ENST00000438441 1338 ntBASIC6.9□□□□□ -1.3
RFC1P35251 AC022613.3-201ENST00000560740 1346 ntBASIC6.9□□□□□ -1.3
RFC1P35251 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.9□□□□□ -1.3
RFC1P35251 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RFC1P35251 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
RFC1P35251 AC006600.2-201ENST00000624834 2506 ntBASIC6.9□□□□□ -1.31
RFC1P35251 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RFC1P35251 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.9□□□□□ -1.31
RFC1P35251 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.89□□□□□ -1.31
RFC1P35251 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 PARP4P1-201ENST00000435945 2337 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RFC1P35251 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.89□□□□□ -1.31
RFC1P35251 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 OR7A2P-201ENST00000304105 930 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.89□□□□□ -1.31
RFC1P35251 AC092634.1-201ENST00000366505 199 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AC026310.1-201ENST00000396004 378 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AC006509.1-201ENST00000420788 634 ntBASIC6.89□□□□□ -1.31
RFC1P35251 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.89□□□□□ -1.31
RFC1P35251 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.89□□□□□ -1.31
RFC1P35251 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.89□□□□□ -1.31
RFC1P35251 UBBP5-201ENST00000446970 266 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.89□□□□□ -1.31
RFC1P35251 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RFC1P35251 RPL5P14-201ENST00000494197 878 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.89□□□□□ -1.31
RFC1P35251 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.89□□□□□ -1.31
RFC1P35251 RNA5SP116-201ENST00000516132 98 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AC021733.2-201ENST00000518830 497 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AC008429.2-201ENST00000523057 864 ntBASIC6.89□□□□□ -1.31
RFC1P35251 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.89□□□□□ -1.31
RFC1P35251 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RFC1P35251 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.89□□□□□ -1.31
RFC1P35251 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.89□□□□□ -1.31
RFC1P35251 AL161912.3-201ENST00000605404 628 ntBASIC6.89□□□□□ -1.31
RFC1P35251 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.89□□□□□ -1.31
RFC1P35251 AC093635.1-201ENST00000609028 555 ntBASIC6.89□□□□□ -1.31
RFC1P35251 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.89□□□□□ -1.31
RFC1P35251 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RFC1P35251 AL117378.2-201ENST00000622916 1337 ntBASIC6.89□□□□□ -1.31
RFC1P35251 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.89□□□□□ -1.31
RFC1P35251 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RFC1P35251 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
RFC1P35251 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
RFC1P35251 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.89□□□□□ -1.31
RFC1P35251 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.89□□□□□ -1.31
RFC1P35251 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.89□□□□□ -1.31
RFC1P35251 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFC1P35251 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RFC1P35251 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.88□□□□□ -1.31
RFC1P35251 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RFC1P35251 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RFC1P35251 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.88□□□□□ -1.31
RFC1P35251 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.88□□□□□ -1.31
RFC1P35251 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RFC1P35251 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
RFC1P35251 AC010624.4-201ENST00000597606 1351 ntBASIC6.88□□□□□ -1.31
RFC1P35251 AC007342.9-201ENST00000623877 1385 ntBASIC6.88□□□□□ -1.31
RFC1P35251 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.88□□□□□ -1.31
RFC1P35251 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.88□□□□□ -1.31
RFC1P35251 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RFC1P35251 RNA5SP188-201ENST00000362916 129 ntBASIC6.88□□□□□ -1.31
RFC1P35251 RNA5SP333-201ENST00000363466 118 ntBASIC6.88□□□□□ -1.31
RFC1P35251 RN7SKP118-201ENST00000364331 330 ntBASIC6.88□□□□□ -1.31
RFC1P35251 RNA5SP334-201ENST00000364825 118 ntBASIC6.88□□□□□ -1.31
RFC1P35251 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.88□□□□□ -1.31
RFC1P35251 CYCSP52-201ENST00000422857 310 ntBASIC6.88□□□□□ -1.31
RFC1P35251 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.88□□□□□ -1.31
RFC1P35251 RPS19P6-201ENST00000441327 433 ntBASIC6.88□□□□□ -1.31
RFC1P35251 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.88□□□□□ -1.31
RFC1P35251 NPM1P27-201ENST00000502784 830 ntBASIC6.88□□□□□ -1.31
RFC1P35251 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.88□□□□□ -1.31
RFC1P35251 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.88□□□□□ -1.31
RFC1P35251 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.88□□□□□ -1.31
RFC1P35251 SCARNA5-201ENST00000516201 276 ntBASIC6.88□□□□□ -1.31
RFC1P35251 CASP1P2-201ENST00000526830 1258 ntBASIC6.88□□□□□ -1.31
RFC1P35251 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RFC1P35251 AC005519.1-201ENST00000554490 601 ntBASIC6.88□□□□□ -1.31
RFC1P35251 AC026956.1-201ENST00000558741 396 ntBASIC6.88□□□□□ -1.31
RFC1P35251 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RFC1P35251 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.88□□□□□ -1.31
RFC1P35251 OR4C49P-201ENST00000563891 900 ntBASIC6.88□□□□□ -1.31
RFC1P35251 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.88□□□□□ -1.31
RFC1P35251 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RFC1P35251 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms