Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.33□□□□□ -1.24
CIITAP33076 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CIITAP33076 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CIITAP33076 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.32□□□□□ -1.24
CIITAP33076 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.32□□□□□ -1.24
CIITAP33076 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 RN7SKP250-201ENST00000363924 321 ntBASIC7.32□□□□□ -1.24
CIITAP33076 PRELID1P1-201ENST00000403549 660 ntBASIC7.32□□□□□ -1.24
CIITAP33076 RN7SKP281-201ENST00000410472 352 ntBASIC7.32□□□□□ -1.24
CIITAP33076 NPM1P36-201ENST00000415681 835 ntBASIC7.32□□□□□ -1.24
CIITAP33076 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 THEM7P-201ENST00000419556 672 ntBASIC7.32□□□□□ -1.24
CIITAP33076 AC002127.1-201ENST00000421305 225 ntBASIC7.32□□□□□ -1.24
CIITAP33076 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.32□□□□□ -1.24
CIITAP33076 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 BMP6P1-201ENST00000431230 679 ntBASIC7.32□□□□□ -1.24
CIITAP33076 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.32□□□□□ -1.24
CIITAP33076 OR2L9P-201ENST00000444456 913 ntBASIC7.32□□□□□ -1.24
CIITAP33076 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7.32□□□□□ -1.24
CIITAP33076 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.32□□□□□ -1.24
CIITAP33076 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.32□□□□□ -1.24
CIITAP33076 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.32□□□□□ -1.24
CIITAP33076 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 AP003033.2-201ENST00000528901 805 ntBASIC7.32□□□□□ -1.24
CIITAP33076 AC008055.1-201ENST00000547032 609 ntBASIC7.32□□□□□ -1.24
CIITAP33076 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.32□□□□□ -1.24
CIITAP33076 MTATP6P25-201ENST00000574491 261 ntBASIC7.32□□□□□ -1.24
CIITAP33076 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 AC097467.4-201ENST00000605504 141 ntBASIC7.32□□□□□ -1.24
CIITAP33076 AL353729.2-201ENST00000605859 1249 ntBASIC7.32□□□□□ -1.24
CIITAP33076 AC012676.3-201ENST00000614983 479 ntBASIC7.32□□□□□ -1.24
CIITAP33076 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.32□□□□□ -1.24
CIITAP33076 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CIITAP33076 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CIITAP33076 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.32□□□□□ -1.24
CIITAP33076 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.32□□□□□ -1.24
CIITAP33076 AC010329.1-201ENST00000593903 8328 ntBASIC7.31□□□□□ -1.24
CIITAP33076 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
CIITAP33076 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 AL359694.2-201ENST00000567753 1615 ntBASIC7.31□□□□□ -1.24
CIITAP33076 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.31□□□□□ -1.24
CIITAP33076 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.31□□□□□ -1.24
CIITAP33076 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 RNA5SP485-201ENST00000365053 119 ntBASIC7.31□□□□□ -1.24
CIITAP33076 AL050335.1-201ENST00000396909 869 ntBASIC7.31□□□□□ -1.24
CIITAP33076 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.31□□□□□ -1.24
CIITAP33076 AC007383.1-201ENST00000445875 636 ntBASIC7.31□□□□□ -1.24
CIITAP33076 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 RN7SL39P-201ENST00000462264 297 ntBASIC7.31□□□□□ -1.24
CIITAP33076 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.31□□□□□ -1.24
CIITAP33076 HMGN1P16-201ENST00000508308 283 ntBASIC7.31□□□□□ -1.24
CIITAP33076 RNA5SP418-201ENST00000515951 117 ntBASIC7.31□□□□□ -1.24
CIITAP33076 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.31□□□□□ -1.24
CIITAP33076 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.31□□□□□ -1.24
CIITAP33076 TPRX1P1-201ENST00000557620 319 ntBASIC7.31□□□□□ -1.24
CIITAP33076 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.31□□□□□ -1.24
CIITAP33076 AC090616.1-201ENST00000583895 447 ntBASIC7.31□□□□□ -1.24
CIITAP33076 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.31□□□□□ -1.24
CIITAP33076 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 MRPL57P1-201ENST00000621486 265 ntBASIC7.31□□□□□ -1.24
CIITAP33076 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CIITAP33076 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CIITAP33076 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 TMEM75-201ENST00000624314 2165 ntBASIC7.3□□□□□ -1.24
CIITAP33076 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CIITAP33076 AC011592.1-201ENST00000624647 3634 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms