Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE4BO95155 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE4BO95155 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE4BO95155 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
UBE4BO95155 MARK2P4-201ENST00000503381 2380 ntBASIC7.08□□□□□ -1.28
UBE4BO95155 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE4BO95155 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
UBE4BO95155 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE4BO95155 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
UBE4BO95155 AC074386.1-206ENST00000487102 761 ntBASIC7.08□□□□□ -1.28
UBE4BO95155 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.08□□□□□ -1.28
UBE4BO95155 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE4BO95155 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE4BO95155 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 AC133552.4-201ENST00000576103 676 ntBASIC7.08□□□□□ -1.28
UBE4BO95155 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.08□□□□□ -1.28
UBE4BO95155 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.08□□□□□ -1.28
UBE4BO95155 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.08□□□□□ -1.28
UBE4BO95155 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
UBE4BO95155 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.08□□□□□ -1.28
UBE4BO95155 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE4BO95155 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
UBE4BO95155 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
UBE4BO95155 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.08□□□□□ -1.28
UBE4BO95155 AC217777.1-201ENST00000570034 1471 ntBASIC7.08□□□□□ -1.28
UBE4BO95155 EPS15P1-202ENST00000459691 2071 ntBASIC7.08□□□□□ -1.28
UBE4BO95155 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE4BO95155 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE4BO95155 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.08□□□□□ -1.28
UBE4BO95155 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE4BO95155 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UBE4BO95155 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UBE4BO95155 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.07□□□□□ -1.28
UBE4BO95155 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UBE4BO95155 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UBE4BO95155 SNORD16-201ENST00000362803 99 ntBASIC7.07□□□□□ -1.28
UBE4BO95155 AL034417.1-201ENST00000399343 800 ntBASIC7.07□□□□□ -1.28
UBE4BO95155 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.07□□□□□ -1.28
UBE4BO95155 AL356121.1-201ENST00000442911 156 ntBASIC7.07□□□□□ -1.28
UBE4BO95155 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.07□□□□□ -1.28
UBE4BO95155 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.07□□□□□ -1.28
UBE4BO95155 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
UBE4BO95155 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.07□□□□□ -1.28
UBE4BO95155 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.07□□□□□ -1.28
UBE4BO95155 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.07□□□□□ -1.28
UBE4BO95155 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.07□□□□□ -1.28
UBE4BO95155 AC025283.1-201ENST00000572039 734 ntBASIC7.07□□□□□ -1.28
UBE4BO95155 AC090616.1-201ENST00000583895 447 ntBASIC7.07□□□□□ -1.28
UBE4BO95155 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.07□□□□□ -1.28
UBE4BO95155 AL390877.1-201ENST00000605704 214 ntBASIC7.07□□□□□ -1.28
UBE4BO95155 AL589743.6-201ENST00000611025 117 ntBASIC7.07□□□□□ -1.28
UBE4BO95155 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.07□□□□□ -1.28
UBE4BO95155 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.07□□□□□ -1.28
UBE4BO95155 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE4BO95155 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE4BO95155 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.07□□□□□ -1.28
UBE4BO95155 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
UBE4BO95155 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE4BO95155 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
UBE4BO95155 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UBE4BO95155 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE4BO95155 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UBE4BO95155 AC006213.6-201ENST00000623722 4179 ntBASIC7.07□□□□□ -1.28
UBE4BO95155 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UBE4BO95155 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
UBE4BO95155 AL591848.4-201ENST00000567832 3472 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.06□□□□□ -1.28
UBE4BO95155 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.06□□□□□ -1.28
UBE4BO95155 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UBE4BO95155 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
UBE4BO95155 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
UBE4BO95155 AC007406.5-201ENST00000570140 3170 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 AC079248.1-201ENST00000427568 1546 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UBE4BO95155 RNA5SP85-201ENST00000365378 119 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 RNU2-18P-201ENST00000411224 162 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.06□□□□□ -1.28
UBE4BO95155 RPL36P18-201ENST00000419316 318 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.06□□□□□ -1.28
UBE4BO95155 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.06□□□□□ -1.28
UBE4BO95155 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.06□□□□□ -1.28
UBE4BO95155 RPL9P15-201ENST00000491096 532 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.06□□□□□ -1.28
UBE4BO95155 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.06□□□□□ -1.28
UBE4BO95155 LDHBP3-201ENST00000514909 822 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.06□□□□□ -1.28
UBE4BO95155 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.06□□□□□ -1.28
UBE4BO95155 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.06□□□□□ -1.28
UBE4BO95155 AC037479.1-201ENST00000558361 625 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 AC023968.1-201ENST00000560719 475 ntBASIC7.06□□□□□ -1.28
UBE4BO95155 AC137695.1-201ENST00000604126 489 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms