Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ZNF519P4-201ENST00000514008 125 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 RN7SKP70-201ENST00000516655 271 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AC008055.1-201ENST00000547032 609 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AC026898.1-201ENST00000586404 571 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 SMIM12P1-201ENST00000603004 274 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AC011369.2-201ENST00000624423 1567 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AC023245.2-201ENST00000530760 2978 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 MIR621-201ENST00000384919 96 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC008171.1-201ENST00000395058 200 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL451136.1-201ENST00000435399 325 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 HSD3BP3-201ENST00000514706 994 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC073581.1-201ENST00000519036 575 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AP005639.1-201ENST00000526939 192 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 OR7A11P-201ENST00000597719 953 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC005393.1-201ENST00000617916 584 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL023284.3-201ENST00000407767 334 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 MED28P4-201ENST00000433137 572 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC093166.3-201ENST00000448785 303 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AP002884.1-201ENST00000479691 655 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC068522.1-201ENST00000482895 345 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC139272.1-201ENST00000505516 640 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC091874.2-201ENST00000505889 720 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC131392.1-201ENST00000506490 633 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AC097467.4-201ENST00000605504 141 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL135999.3-201ENST00000610501 812 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 CASC19-274ENST00000642018 970 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 AL136531.3-201ENST00000624378 3658 ntBASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms