Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 AC079148.1-201ENST00000565944 819 ntBASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 CR589904.2-201ENST00000612533 440 ntBASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 FKBP1AP4-201ENST00000631775 336 ntBASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 PSMC1P4-201ENST00000515236 1327 ntBASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
AMBRA1Q9C0C7 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC010329.1-201ENST00000593903 8328 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 MKI67P1-201ENST00000604297 1460 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC093278.2-201ENST00000564956 2485 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 CASC19-261ENST00000641853 1638 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 OR2M1P-201ENST00000318104 951 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 RN7SKP47-201ENST00000365347 328 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 MIR138-2-201ENST00000384916 84 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 TRAV35-201ENST00000390462 330 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SOD1P1-201ENST00000407803 440 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 CYP4F34P-201ENST00000425951 481 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 E2F6P1-201ENST00000428850 745 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SNORA35.1-201ENST00000458908 128 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 RPS4XP19-201ENST00000460237 736 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC011352.2-201ENST00000514574 1016 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SCARNA6-201ENST00000515982 265 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 IGKV2-4-201ENST00000523070 340 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL135978.1-201ENST00000553618 1266 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 RN7SL131P-201ENST00000579043 256 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC061975.3-201ENST00000583209 244 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SIGLEC31P-201ENST00000594237 551 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL136139.1-201ENST00000605568 222 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL445647.2-201ENST00000615170 130 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC016542.3-201ENST00000623520 619 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL049541.2-201ENST00000626377 555 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AL355377.1-201ENST00000621125 1653 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 AC129502.1-201ENST00000623261 1654 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 RBPJP6-201ENST00000411556 1431 ntBASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.41□□□□□ -1.38
AMBRA1Q9C0C7 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms