Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
BEST4Q8NFU0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
BEST4Q8NFU0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BEST4Q8NFU0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BEST4Q8NFU0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
BEST4Q8NFU0 AC130360.2-201ENST00000533477 1556 ntBASIC5.55□□□□□ -1.52
BEST4Q8NFU0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 NEK2P2-201ENST00000438441 1338 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 RPL7AP14-201ENST00000424041 802 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 MRPS21P2-201ENST00000424704 264 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 VDAC2P3-201ENST00000430995 828 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 BX005266.3-201ENST00000443013 1075 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 VN1R38P-201ENST00000450265 887 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AL928654.1-201ENST00000476081 354 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 RN7SL849P-201ENST00000485236 295 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC090058.1-201ENST00000498788 435 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 NATP-201ENST00000523491 878 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 NDUFA3P2-201ENST00000531434 232 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AP000619.2-201ENST00000546014 969 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC091304.4-201ENST00000565703 620 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 NDUFA3P1-201ENST00000588007 252 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AL590032.1-201ENST00000604920 252 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC005277.2-201ENST00000617898 390 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC010320.5-201ENST00000619124 676 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC008626.2-201ENST00000624425 248 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 ZNF806-201ENST00000438300 1774 ntBASIC5.54□□□□□ -1.52
BEST4Q8NFU0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
BEST4Q8NFU0 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 SHQ1P1-201ENST00000437111 1544 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 RNU12-2P-201ENST00000364789 156 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC109638.1-201ENST00000417406 326 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 CYCSP52-201ENST00000422857 310 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AL590128.1-201ENST00000433407 286 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 SNX18P9-201ENST00000440580 835 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AL355032.1-201ENST00000472981 438 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 RN7SL654P-201ENST00000479178 292 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 RPL7AP23-201ENST00000482625 776 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC091965.3-201ENST00000506236 208 ntBASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.53□□□□□ -1.52
BEST4Q8NFU0 SSU72P6-201ENST00000532644 488 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms