Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
FOXR1Q6PIV2 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FOXR1Q6PIV2 AL133243.4-201ENST00000623116 3109 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AHCYP5-201ENST00000331585 1238 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 RNU1-47P-201ENST00000362966 163 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 U3.4-201ENST00000363352 213 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 FNDC3CP-201ENST00000420795 1155 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 RANP5-201ENST00000427731 655 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 MTCO1P43-201ENST00000431831 488 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 EEF1E1P1-201ENST00000446998 430 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 RN7SL508P-201ENST00000464472 303 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC026254.1-201ENST00000479473 431 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 RPS6P4-201ENST00000494693 758 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 DSTNP2-201ENST00000504533 515 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 MTND2P33-201ENST00000506452 1031 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC114812.3-201ENST00000509542 730 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC138866.1-201ENST00000514522 497 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 RNU6-405P-201ENST00000516637 110 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 IGLV7-35-201ENST00000523314 340 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 OR8I1P-201ENST00000529291 931 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC087897.1-201ENST00000550134 156 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 PSEN1-223ENST00000557511 1230 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC037479.1-201ENST00000558361 625 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 GARSP1-201ENST00000570895 719 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC087645.1-201ENST00000588528 291 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC005034.4-201ENST00000603612 899 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC016877.3-201ENST00000606778 504 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AP004247.4-201ENST00000608484 942 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 PART1_1.1-201ENST00000611761 217 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 DLEU2_1.1-201ENST00000612089 120 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 DLEU2_1.2-201ENST00000614667 120 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 MIR6505-201ENST00000617206 71 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 RAD17P2-201ENST00000451754 1977 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 SPATA31C1-201ENST00000420021 3895 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 RNF19BPY-201ENST00000458209 1550 ntBASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC8.18□□□□□ -1.1
FOXR1Q6PIV2 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 SPATA31C2-201ENST00000324915 3777 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AL008638.3-201ENST00000623027 5182 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms