Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CL1P78423 CHCHD4P5-201ENST00000436684 427 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CL1P78423 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CL1P78423 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 MEF2AP1-201ENST00000454867 863 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 RBMY2EP-202ENST00000456360 940 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 RN7SL216P-201ENST00000471607 298 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AC016687.1-201ENST00000482574 353 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 CARSP2-201ENST00000520688 277 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 GTF2IP11-201ENST00000526931 420 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 PPIAP6-201ENST00000557078 499 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 RN7SL42P-201ENST00000579786 294 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 MIR8082-201ENST00000612488 81 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AL590410.1-201ENST00000617925 333 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AC091059.2-201ENST00000623355 614 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 AL163152.1-201ENST00000642001 374 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CX3CL1P78423 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.42□□□□□ -1.54
CX3CL1P78423 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CL1P78423 AL078595.2-201ENST00000605309 1780 ntBASIC5.42□□□□□ -1.54
CX3CL1P78423 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC005618.1-201ENST00000606901 3148 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC110597.1-201ENST00000562669 3176 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CX3CL1P78423 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC120036.2-201ENST00000509729 1474 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CX3CL1P78423 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 FUNDC2P3-201ENST00000334716 533 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 RNU6-1331P-201ENST00000363658 106 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 AC074375.1-201ENST00000372993 192 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CX3CL1P78423 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 RNA5SP231-201ENST00000410496 138 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AJ239321.1-201ENST00000424255 564 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.41□□□□□ -1.54
CX3CL1P78423 MTCO1P57-201ENST00000432182 261 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CL1P78423 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CL1P78423 RN7SL390P-201ENST00000470634 284 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC025181.1-201ENST00000477507 416 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 RN7SL654P-201ENST00000479178 292 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 RPL17P2-201ENST00000491913 451 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 RN7SL143P-201ENST00000496780 297 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CL1P78423 SNX18P23-201ENST00000510867 677 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 Vault.2-201ENST00000516519 98 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CL1P78423 NPM1P52-201ENST00000518264 846 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 SUMO2P19-201ENST00000518920 295 ntBASIC5.41□□□□□ -1.54
CX3CL1P78423 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CL1P78423 AC026688.1-201ENST00000520639 1168 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms