Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MRPS6P2-201ENST00000381143 370 ntBASIC6.73□□□□□ -1.33
CDH6P55285 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CDH6P55285 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.73□□□□□ -1.33
CDH6P55285 AC092106.2-201ENST00000436597 487 ntBASIC6.73□□□□□ -1.33
CDH6P55285 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.73□□□□□ -1.33
CDH6P55285 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.73□□□□□ -1.33
CDH6P55285 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.73□□□□□ -1.33
CDH6P55285 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 RNU2-45P-201ENST00000516068 187 ntBASIC6.73□□□□□ -1.33
CDH6P55285 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH6P55285 AC092718.4-201ENST00000566639 716 ntBASIC6.73□□□□□ -1.33
CDH6P55285 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH6P55285 MIR6774-201ENST00000614651 70 ntBASIC6.73□□□□□ -1.33
CDH6P55285 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH6P55285 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH6P55285 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 AC022034.1-201ENST00000512867 2156 ntBASIC6.73□□□□□ -1.33
CDH6P55285 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH6P55285 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH6P55285 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CDH6P55285 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.72□□□□□ -1.33
CDH6P55285 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 AC009135.2-201ENST00000624136 1768 ntBASIC6.72□□□□□ -1.33
CDH6P55285 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 AC105235.1-201ENST00000623208 1816 ntBASIC6.72□□□□□ -1.33
CDH6P55285 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CDH6P55285 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 AC245036.1-201ENST00000391727 309 ntBASIC6.72□□□□□ -1.33
CDH6P55285 MIR1266-201ENST00000408125 84 ntBASIC6.72□□□□□ -1.33
CDH6P55285 AL353626.3-201ENST00000413399 657 ntBASIC6.72□□□□□ -1.33
CDH6P55285 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.72□□□□□ -1.33
CDH6P55285 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.72□□□□□ -1.33
CDH6P55285 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 VN1R38P-201ENST00000450265 887 ntBASIC6.72□□□□□ -1.33
CDH6P55285 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.72□□□□□ -1.33
CDH6P55285 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH6P55285 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 RPS7P11-201ENST00000484240 586 ntBASIC6.72□□□□□ -1.33
CDH6P55285 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH6P55285 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH6P55285 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH6P55285 IGHV1-14-201ENST00000523391 241 ntBASIC6.72□□□□□ -1.33
CDH6P55285 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 AC073916.1-201ENST00000545095 130 ntBASIC6.72□□□□□ -1.33
CDH6P55285 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.72□□□□□ -1.33
CDH6P55285 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.72□□□□□ -1.33
CDH6P55285 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.72□□□□□ -1.33
CDH6P55285 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.72□□□□□ -1.33
CDH6P55285 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.72□□□□□ -1.33
CDH6P55285 AC036176.3-201ENST00000602456 418 ntBASIC6.72□□□□□ -1.33
CDH6P55285 AC114477.1-201ENST00000605097 605 ntBASIC6.72□□□□□ -1.33
CDH6P55285 AC022001.1-201ENST00000605193 268 ntBASIC6.72□□□□□ -1.33
CDH6P55285 AC019257.2-201ENST00000605539 497 ntBASIC6.72□□□□□ -1.33
CDH6P55285 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 TCL6_3.1-201ENST00000619064 137 ntBASIC6.72□□□□□ -1.33
CDH6P55285 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 FANCD2P2-201ENST00000437591 1400 ntBASIC6.72□□□□□ -1.33
CDH6P55285 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH6P55285 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CDH6P55285 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH6P55285 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDH6P55285 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.71□□□□□ -1.33
CDH6P55285 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CDH6P55285 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.71□□□□□ -1.33
CDH6P55285 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CDH6P55285 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CDH6P55285 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.71□□□□□ -1.33
CDH6P55285 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
CDH6P55285 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH6P55285 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.71□□□□□ -1.34
CDH6P55285 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH6P55285 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH6P55285 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH6P55285 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH6P55285 RN7SL83P-201ENST00000468131 297 ntBASIC6.71□□□□□ -1.34
CDH6P55285 RPS4XP17-201ENST00000479057 754 ntBASIC6.71□□□□□ -1.34
CDH6P55285 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.71□□□□□ -1.34
CDH6P55285 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH6P55285 AC093870.1-201ENST00000506837 213 ntBASIC6.71□□□□□ -1.34
CDH6P55285 AC084851.2-201ENST00000530377 364 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms