Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UBCP0CG48 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.73□□□□□ -1.49
UBCP0CG48 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UBCP0CG48 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
UBCP0CG48 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UBCP0CG48 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UBCP0CG48 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
UBCP0CG48 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.72□□□□□ -1.49
UBCP0CG48 TRIM53CP-201ENST00000531490 1354 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
UBCP0CG48 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 AL359694.1-201ENST00000403247 604 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 SOD1P1-201ENST00000407803 440 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.72□□□□□ -1.49
UBCP0CG48 RN7SKP30-201ENST00000411373 334 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.72□□□□□ -1.49
UBCP0CG48 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 AL929472.1-201ENST00000417484 429 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.72□□□□□ -1.49
UBCP0CG48 AC009362.1-201ENST00000427253 406 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.72□□□□□ -1.49
UBCP0CG48 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.72□□□□□ -1.49
UBCP0CG48 GAPDHP20-201ENST00000444107 1007 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 AC009963.4-201ENST00000448535 339 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 PCMTD1P3-201ENST00000451824 472 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 RPL23AP64-201ENST00000469465 435 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 RPS16P9-201ENST00000477220 427 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 NPM1P27-201ENST00000502784 830 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 OR52H2P-201ENST00000514607 902 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 IGKV2D-38-201ENST00000518423 240 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 AC024451.4-201ENST00000602578 752 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 FXYD6P1-201ENST00000604857 285 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.72□□□□□ -1.49
UBCP0CG48 MIR6807-201ENST00000621968 92 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 AC006328.2-201ENST00000623198 397 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 AC012005.2-201ENST00000624333 397 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.72□□□□□ -1.49
UBCP0CG48 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.72□□□□□ -1.49
UBCP0CG48 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
UBCP0CG48 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 AC011455.2-201ENST00000599320 3336 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.72□□□□□ -1.49
UBCP0CG48 NEK2P2-201ENST00000438441 1338 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UBCP0CG48 AC011369.2-201ENST00000624423 1567 ntBASIC5.72□□□□□ -1.49
UBCP0CG48 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.71□□□□□ -1.49
UBCP0CG48 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
UBCP0CG48 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
UBCP0CG48 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.71□□□□□ -1.49
UBCP0CG48 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.71□□□□□ -1.49
UBCP0CG48 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.71□□□□□ -1.49
UBCP0CG48 MSL3P1-202ENST00000440028 1468 ntBASIC5.71□□□□□ -1.49
UBCP0CG48 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
UBCP0CG48 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
UBCP0CG48 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.71□□□□□ -1.49
UBCP0CG48 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
UBCP0CG48 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 AC116036.1-201ENST00000412199 367 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 AL359092.1-201ENST00000417156 265 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 SETP9-201ENST00000423837 832 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.71□□□□□ -1.5
UBCP0CG48 AL590399.4-201ENST00000436561 601 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.71□□□□□ -1.5
UBCP0CG48 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.71□□□□□ -1.5
UBCP0CG48 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.71□□□□□ -1.5
UBCP0CG48 SNX18P26-201ENST00000458433 740 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 RN7SL456P-201ENST00000469290 295 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 TUBBP11-201ENST00000472255 252 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 RPL5P15-201ENST00000475870 897 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.71□□□□□ -1.5
UBCP0CG48 AC073916.1-201ENST00000545095 130 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 FAM30C-201ENST00000561158 410 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 MIR378C-201ENST00000578683 81 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 AC011193.2-201ENST00000582638 367 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms