Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AL022311.1-201ENST00000623726 19416 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC022164.1-201ENST00000568767 2673 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC016745.2-201ENST00000608834 3443 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RNA5SP396-201ENST00000364834 120 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RNA5SP427-201ENST00000365323 119 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AL359715.1-201ENST00000404330 555 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 CYP4F30P-202ENST00000420048 405 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AL354766.1-201ENST00000423396 542 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AL365220.1-201ENST00000432923 399 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RPL6P24-201ENST00000445338 864 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 PCMTD1P3-201ENST00000451824 472 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 PABPC1P10-201ENST00000464731 381 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RN7SL221P-201ENST00000466190 281 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC018475.1-201ENST00000478358 465 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RN7SL379P-201ENST00000479912 293 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AL035690.1-201ENST00000490892 383 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RN7SL284P-201ENST00000498823 275 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC087257.2-201ENST00000538759 928 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 VDAC2P2-201ENST00000544463 901 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AF186192.2-204ENST00000581667 524 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AL136139.1-201ENST00000605568 222 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC122710.3-201ENST00000606566 541 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RN7SL778P-201ENST00000607160 297 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 MIR6737-201ENST00000617385 70 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 PART1_3.1-201ENST00000619680 131 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC002094.5-201ENST00000623773 629 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 CDY19P-201ENST00000411668 1613 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 CDY18P-201ENST00000438294 1609 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 AOX3P-204ENST00000491025 2107 ntBASIC4.85□□□□□ -1.63
HLA-DQA1P01909 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1P01909 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AC092692.1-201ENST00000623625 2595 ntBASIC4.84□□□□□ -1.63
HLA-DQA1P01909 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 SNORA70.3-201ENST00000365075 132 ntBASIC4.84□□□□□ -1.63
HLA-DQA1P01909 RNU1-55P-201ENST00000365510 158 ntBASIC4.84□□□□□ -1.63
HLA-DQA1P01909 MIR1231-201ENST00000408101 92 ntBASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AL590399.4-201ENST00000436561 601 ntBASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AC093799.1-201ENST00000452411 499 ntBASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 HNRNPA1P17-201ENST00000496620 924 ntBASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DQA1P01909 AC139713.1-202ENST00000512366 460 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 318.2 ms