Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL669831.5-218ENST00000591702 1873 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 RNU1-5P-201ENST00000362684 144 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AL451142.1-201ENST00000375867 775 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 MIR551B-201ENST00000384984 96 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 RNA5SP251-201ENST00000410614 137 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC092106.2-201ENST00000436597 487 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 COL11A2P1-205ENST00000441798 676 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 SNX18P26-201ENST00000458433 740 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC018645.1-201ENST00000505003 109 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC093664.1-201ENST00000511779 289 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC114940.1-201ENST00000512162 1265 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 RN7SL208P-201ENST00000577964 296 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC233702.7-202ENST00000582941 211 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC024589.2-201ENST00000605642 1294 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC079414.3-201ENST00000612986 1090 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC009220.2-201ENST00000489759 1751 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC092634.1-201ENST00000366505 199 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC026310.1-201ENST00000396004 378 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 RN7SKP281-201ENST00000410472 352 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC116036.1-201ENST00000412199 367 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC009244.1-201ENST00000450566 258 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 RPL17P2-201ENST00000491913 451 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC091965.3-201ENST00000506236 208 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 MRPS5P3-201ENST00000515577 166 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 TPRX1P1-201ENST00000557620 319 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 OR4C49P-201ENST00000563891 900 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC019257.2-201ENST00000605539 497 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 RPL31P11-201ENST00000426558 1558 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 PRNCR1-201ENST00000635449 12727 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 AC005702.3-201ENST00000585345 1447 ntBASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO3Q9BXY4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.9□□□□□ -1.46
RSPO3Q9BXY4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO3Q9BXY4 AL662795.2-201ENST00000624252 3706 ntBASIC5.9□□□□□ -1.46
RSPO3Q9BXY4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO3Q9BXY4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO3Q9BXY4 AOX3P-204ENST00000491025 2107 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms