Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC120036.3-201ENST00000517826 292 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX3Q99909 RGS5-220ENST00000528689 566 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
SSX3Q99909 OR5M6P-201ENST00000530227 937 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX3Q99909 FXNP1-201ENST00000555153 337 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX3Q99909 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC010463.3-201ENST00000594077 500 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX3Q99909 AC023513.1-201ENST00000604396 691 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 MIR6070-201ENST00000613967 103 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC245407.2-201ENST00000614199 451 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 AL049541.2-201ENST00000626377 555 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX3Q99909 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSX3Q99909 AL139254.2-202ENST00000641937 1156 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 AC026523.2-201ENST00000625039 7739 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 AC126474.2-201ENST00000623268 1750 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 AL512353.3-201ENST00000417517 1326 ntBASIC5.72□□□□□ -1.49
SSX3Q99909 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSX3Q99909 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX3Q99909 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX3Q99909 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SSX3Q99909 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.71□□□□□ -1.49
SSX3Q99909 PROS2P-201ENST00000474651 1951 ntBASIC5.71□□□□□ -1.49
SSX3Q99909 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SSX3Q99909 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SSX3Q99909 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX3Q99909 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX3Q99909 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX3Q99909 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX3Q99909 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX3Q99909 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX3Q99909 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX3Q99909 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSX3Q99909 RNA5SP333-201ENST00000363466 118 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 RNU6-1017P-201ENST00000363613 106 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 RNA5SP334-201ENST00000364825 118 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX3Q99909 SNORA70.9-201ENST00000384370 135 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX3Q99909 HNRNPH1P2-201ENST00000396845 1210 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 EEF1GP6-201ENST00000402309 905 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AL136100.1-201ENST00000407696 330 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 RN7SKP232-201ENST00000410170 290 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 RN7SKP254-201ENST00000410685 310 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AL445213.1-201ENST00000412589 747 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.71□□□□□ -1.5
SSX3Q99909 AL691447.1-201ENST00000419456 387 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AL034379.1-201ENST00000423216 253 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 MRPS21P2-201ENST00000424704 264 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 SNRPEP5-201ENST00000425442 278 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX3Q99909 AC114402.2-201ENST00000432760 643 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 SNORA81.1-201ENST00000458922 177 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 RN7SL88P-201ENST00000480166 299 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 RPS7P11-201ENST00000484240 586 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AC012123.2-201ENST00000485809 248 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AC026774.2-201ENST00000513990 1098 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 SCARNA6-201ENST00000515982 265 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 RN7SKP248-201ENST00000516278 305 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SSX3Q99909 SSU72P6-201ENST00000532644 488 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AC079866.1-201ENST00000534985 1220 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX3Q99909 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX3Q99909 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX3Q99909 AC026458.1-201ENST00000564330 438 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 ULK4P1-202ENST00000565174 503 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.71□□□□□ -1.5
SSX3Q99909 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX3Q99909 AC060766.1-201ENST00000590824 627 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 VN1R81P-201ENST00000602085 372 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms